DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKSTT
Uniprot ID:
Q9Y2R2
Source protein:
Tyrosine-protein phosphatase non-receptor type 22
Source gene:
PTPN22
Class:
DEG_SPOP_SBC_1
Location:
329:333
E3 ligase:
SPOP
DEGRON score:
0.828
ASA_SCORE:
85.04
COIL:
0.7796
CONS_SCORE:
0.2457
DSS_SCORE:
0.6286
HELIX:
0.1924
FCONS_SCORE:
0.9309
RIG_SCORE:
0.6793
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A335G
DO228974
LICA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.2778
p.T333K
DO228971
LICA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.7306
p.A335E
DO229045
LICA
ICGC
PKSTT
DEG_SPOP_SBC_1
0.2778
p.S325Y
SIDM01368
Gastric Carcinoma
GDSC
PKSTT
DEG_SPOP_SBC_1
0.6667
p.S325Y
ACH-000255
Gastric Cancer
CCLE
PKSTT
DEG_SPOP_SBC_1
0.6667
p.R331T
KOSC-2
upper_aerodigestive_tract
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.7876
p.I337M
SNU-81
large_intestine
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.6667
p.E340G
ESO51
oesophagus
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.1389
p.F342L
KYSE-510
oesophagus
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.0833
p.E340K
Mewo
skin
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.1389
p.E327K
LB2518-MEL
skin
COSMIC
PKSTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with PTPN22 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07359
Platelet glycoprotein Ib alpha chain
DEG_SPOP_SBC_1
376:380
PKSTT
SPOP
0.9058
More...
Q14966
Zinc finger protein 638
DEG_SPOP_SBC_1
1518:1522
PKSTT
SPOP
0.7644
More...
Q52LJ0
Protein FAM98B
DEG_SPOP_SBC_1
160:164
PKSTT
SPOP
0.9796
More...
Q9BZW7
Testis-specific gene 10 protein
DEG_SPOP_SBC_1
89:93
PKSTT
SPOP
0.765
More...
Q9UMN6
Histone-lysine N-methyltransferase 2B
DEG_SPOP_SBC_1
515:519
PKSTT
SPOP
0.9463
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_SPOP_SBC_1
329:333
PKSTT
SPOP
0.828
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1324:1328
PKSTT
SPOP
0.9941
More...