DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PRTST
Uniprot ID:
Q6P2H3
Source protein:
Centrosomal protein of 85 kDa
Source gene:
CEP85
Class:
DEG_SPOP_SBC_1
Location:
210:214
E3 ligase:
SPOP
DEGRON score:
0.9974
ASA_SCORE:
87.64
COIL:
0.8644
CONS_SCORE:
0.6734
DSS_SCORE:
0.5509
HELIX:
0.1156
FCONS_SCORE:
0.9857
RIG_SCORE:
0.6605
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S215N
TCGA-BR-4280
STAD
TCGA
PRTST
DEG_SPOP_SBC_1
0.75
p.S215N
DO38663
STAD
ICGC
PRTST
DEG_SPOP_SBC_1
0.75
p.Y219C
TCGA-CG-5721
STAD
TCGA
PRTST
DEG_SPOP_SBC_1
0.6389
p.Y219C
DO38192
STAD
ICGC
PRTST
DEG_SPOP_SBC_1
0.6389
p.H203Y
TCGA-GN-A4U3
SKCM
TCGA
PRTST
DEG_SPOP_SBC_1
0.1389
p.H203Y
DO219484
SKCM
ICGC
PRTST
DEG_SPOP_SBC_1
0.1389
p.S213N
DO228483
BRCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO230334
COCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO229010
COCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO229016
COCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO229005
COCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO229346
LAML
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO230659
LAML
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO225404
LAML
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO231140
LAML
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
p.S213N
DO229047
LICA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7069
Drug responses associated with CEP85 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3168:3172
PRTST
SPOP
0.987
More...
Q6P2H3
Centrosomal protein of 85 kDa
DEG_SPOP_SBC_1
210:214
PRTST
SPOP
0.9974
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
289:293
PRTST
SPOP
0.9967
More...
Q8TAP9
M-phase-specific PLK1-interacting protein
DEG_SPOP_SBC_1
116:120
PRTST
SPOP
0.9988
More...
Q96C45
Serine/threonine-protein kinase ULK4
DEG_SPOP_SBC_1
367:371
PRTST
SPOP
0.8239
More...
Q9NZN5
Rho guanine nucleotide exchange factor 12
DEG_SPOP_SBC_1
1328:1332
PRTST
SPOP
0.9959
More...
Q9NY43
BarH-like 2 homeobox protein
DEG_SPOP_SBC_1
135:139
PRTST
SPOP
0.77
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1789:1793
PRTST
SPOP
0.7676
More...