DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTST
Uniprot ID:
Q9NY43
Source protein:
BarH-like 2 homeobox protein
Source gene:
BARHL2
Class:
DEG_SPOP_SBC_1
Location:
135:139
E3 ligase:
SPOP
DEGRON score:
0.77
ASA_SCORE:
99.16
COIL:
0.9276
CONS_SCORE:
0.4125
DSS_SCORE:
0.5939
HELIX:
0.0416
FCONS_SCORE:
1.0389
RIG_SCORE:
0.6213
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L143F
TCGA-EI-6512
READ
TCGA
PRTST
DEG_SPOP_SBC_1
0.2222
p.L143F
DO36455
READ
ICGC
PRTST
DEG_SPOP_SBC_1
0.2222
p.A132T
DO233156
GACA
ICGC
PRTST
DEG_SPOP_SBC_1
0.25
p.S133P
DO233903
GACA
ICGC
PRTST
DEG_SPOP_SBC_1
0.2778
p.L148F
DO26427
LUSC
ICGC
PRTST
DEG_SPOP_SBC_1
0.0833
p.S140F
DO34921
PACA
ICGC
PRTST
DEG_SPOP_SBC_1
0.3056
p.A131D
SIDM00763
Non-Small Cell Lung Carcinoma
GDSC
PRTST
DEG_SPOP_SBC_1
0.2222
p.A131D
ACH-000434
Lung Cancer
CCLE
PRTST
DEG_SPOP_SBC_1
0.2222
p.K145N
ACH-001228
CCLE
PRTST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with BARHL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3168:3172
PRTST
SPOP
0.987
More...
Q6P2H3
Centrosomal protein of 85 kDa
DEG_SPOP_SBC_1
210:214
PRTST
SPOP
0.9974
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
289:293
PRTST
SPOP
0.9967
More...
Q8TAP9
M-phase-specific PLK1-interacting protein
DEG_SPOP_SBC_1
116:120
PRTST
SPOP
0.9988
More...
Q96C45
Serine/threonine-protein kinase ULK4
DEG_SPOP_SBC_1
367:371
PRTST
SPOP
0.8239
More...
Q9NZN5
Rho guanine nucleotide exchange factor 12
DEG_SPOP_SBC_1
1328:1332
PRTST
SPOP
0.9959
More...
Q9NY43
BarH-like 2 homeobox protein
DEG_SPOP_SBC_1
135:139
PRTST
SPOP
0.77
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1789:1793
PRTST
SPOP
0.7676
More...