DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTST
Uniprot ID:
Q9NZN5
Source protein:
Rho guanine nucleotide exchange factor 12
Source gene:
ARHGEF12
Class:
DEG_SPOP_SBC_1
Location:
1328:1332
E3 ligase:
SPOP
DEGRON score:
0.9959
ASA_SCORE:
87.86
COIL:
0.8886
CONS_SCORE:
0.3202
DSS_SCORE:
0.5092
HELIX:
0.0672
FCONS_SCORE:
1.036
RIG_SCORE:
0.7125
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1329L
TCGA-FS-A1ZB
SKCM
TCGA
PRTST
DEG_SPOP_SBC_1
0.7316
p.T1324S
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
PRTST
DEG_SPOP_SBC_1
0.6667
p.T1324S
ACH-000784
Esophageal Cancer
CCLE
PRTST
DEG_SPOP_SBC_1
0.6667
p.T1324S
KYSE-70
oesophagus
COSMIC
PRTST
DEG_SPOP_SBC_1
0.6667
p.R1329Q
TCGA-BR-8487
STAD
TCGA
PRTST
DEG_SPOP_SBC_1
0.6218
p.R1329Q
TCGA-CN-5356
HNSC
TCGA
PRTST
DEG_SPOP_SBC_1
0.6218
p.T1335S
SNU-449
liver
COSMIC
PRTST
DEG_SPOP_SBC_1
0.25
p.R1338L
TCGA-95-7039
LUAD
TCGA
PRTST
DEG_SPOP_SBC_1
0.1667
p.D1321G
TCGA-EY-A5W2
UCEC
TCGA
PRTST
DEG_SPOP_SBC_1
0.1389
p.M1339T
GP5d
large_intestine
COSMIC
PRTST
DEG_SPOP_SBC_1
0.1389
p.R1319L
DO23907
LUAD
ICGC
PRTST
DEG_SPOP_SBC_1
0.0833
p.G1318R
TCGA-HQ-A5NE
BLCA
TCGA
PRTST
DEG_SPOP_SBC_1
0.0556
p.M1342I
DO229018
LICA
ICGC
PRTST
DEG_SPOP_SBC_1
0.0556
p.Y1318H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PRTST
DEG_SPOP_SBC_1
0.0556
Showing 1 to 14 of 14 entries
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Drug responses associated with ARHGEF12 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PRTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NY43
BarH-like 2 homeobox protein
DEG_SPOP_SBC_1
135:139
PRTST
SPOP
0.77
More...
Q6P2H3
Centrosomal protein of 85 kDa
DEG_SPOP_SBC_1
210:214
PRTST
SPOP
0.9974
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
289:293
PRTST
SPOP
0.9967
More...
Q8TAP9
M-phase-specific PLK1-interacting protein
DEG_SPOP_SBC_1
116:120
PRTST
SPOP
0.9988
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3168:3172
PRTST
SPOP
0.987
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1789:1793
PRTST
SPOP
0.7676
More...
Q9NZN5
Rho guanine nucleotide exchange factor 12
DEG_SPOP_SBC_1
1328:1332
PRTST
SPOP
0.9959
More...
Q96C45
Serine/threonine-protein kinase ULK4
DEG_SPOP_SBC_1
367:371
PRTST
SPOP
0.8239
More...
Showing 1 to 8 of 8 entries
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