DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTST
Uniprot ID:
Q96C45
Source protein:
Serine/threonine-protein kinase ULK4
Source gene:
ULK4
Class:
DEG_SPOP_SBC_1
Location:
367:371
E3 ligase:
SPOP
DEGRON score:
0.8239
ASA_SCORE:
96.58
COIL:
0.897
CONS_SCORE:
0.3285
DSS_SCORE:
0.6101
HELIX:
0.0472
FCONS_SCORE:
1.0097
RIG_SCORE:
0.6233
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S376R
TCGA-AJ-A3EL
UCEC
TCGA
PRTST
DEG_SPOP_SBC_1
0.1944
p.S376R
DO41542
UCEC
ICGC
PRTST
DEG_SPOP_SBC_1
0.1944
p.M381I
TCGA-CV-A45X
HNSC
TCGA
PRTST
DEG_SPOP_SBC_1
0.0556
p.M381I
DO52062
HNSC
ICGC
PRTST
DEG_SPOP_SBC_1
0.0556
p.P367L
TCGA-EE-A2M5
SKCM
TCGA
PRTST
DEG_SPOP_SBC_1
0.7582
p.P367L
DO222423
MELA
ICGC
PRTST
DEG_SPOP_SBC_1
0.7582
p.P367L
DO37425
SKCM
ICGC
PRTST
DEG_SPOP_SBC_1
0.7582
p.R364L
TCGA-EJ-5517
PRAD
TCGA
PRTST
DEG_SPOP_SBC_1
0.25
p.R364L
DO36305
PRAD
ICGC
PRTST
DEG_SPOP_SBC_1
0.25
p.M381V
DO229240
THCA
ICGC
PRTST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with ULK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3168:3172
PRTST
SPOP
0.987
More...
Q6P2H3
Centrosomal protein of 85 kDa
DEG_SPOP_SBC_1
210:214
PRTST
SPOP
0.9974
More...
Q8NEV8
Exophilin-5
DEG_SPOP_SBC_1
289:293
PRTST
SPOP
0.9967
More...
Q8TAP9
M-phase-specific PLK1-interacting protein
DEG_SPOP_SBC_1
116:120
PRTST
SPOP
0.9988
More...
Q96C45
Serine/threonine-protein kinase ULK4
DEG_SPOP_SBC_1
367:371
PRTST
SPOP
0.8239
More...
Q9NZN5
Rho guanine nucleotide exchange factor 12
DEG_SPOP_SBC_1
1328:1332
PRTST
SPOP
0.9959
More...
Q9NY43
BarH-like 2 homeobox protein
DEG_SPOP_SBC_1
135:139
PRTST
SPOP
0.77
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1789:1793
PRTST
SPOP
0.7676
More...