DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPSS
Uniprot ID:
P40425
Source protein:
Pre-B-cell leukemia transcription factor 2
Source gene:
PBX2
Class:
DEG_SCF_FBW7_1
Location:
335:340
E3 ligase:
FBXW7
DEGRON score:
0.9228
ASA_SCORE:
89.7667
COIL:
0.95
CONS_SCORE:
0.3219
DSS_SCORE:
0.6898
HELIX:
0.0272
FCONS_SCORE:
1.1003
RIG_SCORE:
0.5498
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S340C
TCGA-4Z-AA7W
BLCA
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.7541
p.S340C
DO218984
BLCA
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.7541
p.N348D
TCGA-AP-A1DR
UCEC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.1111
p.N348D
DO43747
UCEC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.1111
p.S330N
TCGA-B0-5096
KIRC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.6389
p.S330N
DO19218
KIRC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.6389
p.P335T
TCGA-CD-A4MI
STAD
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.7031
p.P335T
DO47717
STAD
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.7031
p.P338R
TCGA-NH-A6GC
COAD
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.6401
p.P338R
DO50093
COAD
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.6401
p.A341V
DO229275
THCA
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.3056
p.T325S
SIDM01608
Endometrial Carcinoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.5
p.T325S
ACH-000990
Endometrial/Uterine Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.5
Drug responses associated with PBX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40425
Pre-B-cell leukemia transcription factor 2
DEG_SCF_FBW7_1
335:340
PTPPSS
FBXW7
0.9228
More...
Q86VP3
Phosphofurin acidic cluster sorting protein 2
DEG_SCF_FBW7_1
721:726
PTPPSS
FBXW7
0.9883
More...
Q86WP2
Vasculin
DEG_SCF_FBW7_1
14:19
PTPPSS
FBXW7
0.9948
More...
Q8IWX8
Calcium homeostasis endoplasmic reticulum protein
DEG_SCF_FBW7_1
818:823
PTPPSS
FBXW7
0.9988
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SCF_FBW7_1
756:761
PTPPSS
FBXW7
0.9859
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SCF_FBW7_1
557:562
PTPPSS
FBXW7
0.8737
More...
Q6NV75
Probable G-protein coupled receptor 153
DEG_SCF_FBW7_1
538:543
PTPPSS
FBXW7
0.9703
More...