DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPSS
Uniprot ID:
Q86VP3
Source protein:
Phosphofurin acidic cluster sorting protein 2
Source gene:
PACS2
Class:
DEG_SCF_FBW7_1
Location:
721:726
E3 ligase:
FBXW7
DEGRON score:
0.9883
ASA_SCORE:
85.2833
COIL:
0.9807
CONS_SCORE:
0.4675
DSS_SCORE:
0.6963
HELIX:
0.0078
FCONS_SCORE:
1.3345
RIG_SCORE:
0.493
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A712V
SIDM00569
Osteosarcoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.0833
p.A712V
NY
bone
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.0833
p.T719M
SIDM00292
Small Cell Lung Carcinoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.T719M
LU-165
lung
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.G731R
ACH-001509
Head and Neck Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.1944
p.V729M
LU-165
lung
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.25
p.K736N
SNU-81
large_intestine
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with PACS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40425
Pre-B-cell leukemia transcription factor 2
DEG_SCF_FBW7_1
335:340
PTPPSS
FBXW7
0.9228
More...
Q86VP3
Phosphofurin acidic cluster sorting protein 2
DEG_SCF_FBW7_1
721:726
PTPPSS
FBXW7
0.9883
More...
Q86WP2
Vasculin
DEG_SCF_FBW7_1
14:19
PTPPSS
FBXW7
0.9948
More...
Q8IWX8
Calcium homeostasis endoplasmic reticulum protein
DEG_SCF_FBW7_1
818:823
PTPPSS
FBXW7
0.9988
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SCF_FBW7_1
756:761
PTPPSS
FBXW7
0.9859
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SCF_FBW7_1
557:562
PTPPSS
FBXW7
0.8737
More...
Q6NV75
Probable G-protein coupled receptor 153
DEG_SCF_FBW7_1
538:543
PTPPSS
FBXW7
0.9703
More...