DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPSS
Uniprot ID:
Q9UPS6
Source protein:
Histone-lysine N-methyltransferase SETD1B
Source gene:
SETD1B
Class:
DEG_SCF_FBW7_1
Location:
557:562
E3 ligase:
FBXW7
DEGRON score:
0.8737
ASA_SCORE:
90.5333
COIL:
0.9738
CONS_SCORE:
0.2864
DSS_SCORE:
0.8556
HELIX:
0.0123
FCONS_SCORE:
1.0177
RIG_SCORE:
0.488
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R555Q
TCGA-AP-A1DK
UCEC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.R555Q
DO42033
UCEC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.I572V
DO23188
LINC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.0556
p.I572V
ACH-000831
Endometrial/Uterine Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.0556
p.S550F
ACH-000931
Skin Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.1389
p.R563H
ACH-000986
Colon/Colorectal Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.3056
p.R563H
ACH-000990
Endometrial/Uterine Cancer
CCLE
PTPPSS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with SETD1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40425
Pre-B-cell leukemia transcription factor 2
DEG_SCF_FBW7_1
335:340
PTPPSS
FBXW7
0.9228
More...
Q86VP3
Phosphofurin acidic cluster sorting protein 2
DEG_SCF_FBW7_1
721:726
PTPPSS
FBXW7
0.9883
More...
Q86WP2
Vasculin
DEG_SCF_FBW7_1
14:19
PTPPSS
FBXW7
0.9948
More...
Q8IWX8
Calcium homeostasis endoplasmic reticulum protein
DEG_SCF_FBW7_1
818:823
PTPPSS
FBXW7
0.9988
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SCF_FBW7_1
756:761
PTPPSS
FBXW7
0.9859
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SCF_FBW7_1
557:562
PTPPSS
FBXW7
0.8737
More...
Q6NV75
Probable G-protein coupled receptor 153
DEG_SCF_FBW7_1
538:543
PTPPSS
FBXW7
0.9703
More...