DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPPSS
Uniprot ID:
Q8IWX8
Source protein:
Calcium homeostasis endoplasmic reticulum protein
Source gene:
CHERP
Class:
DEG_SCF_FBW7_1
Location:
818:823
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
85.5167
COIL:
0.9337
CONS_SCORE:
0.55
DSS_SCORE:
0.8343
HELIX:
0.0492
FCONS_SCORE:
1.5299
RIG_SCORE:
0.4631
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P821A
TCGA-06-1802
GBM
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.6392
p.R811H
TCGA-2W-A8YY
CESC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.1389
p.A831E
TCGA-63-A5MM
LUSC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.1111
p.S815F
TCGA-BF-AAOX
SKCM
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.6944
p.S830L
TCGA-BS-A0UF
UCEC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.5833
p.G827C
TCGA-EO-A3KX
UCEC
TCGA
PTPPSS
DEG_SCF_FBW7_1
0.2222
p.T830P
DO222404
BTCA
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.5833
p.R812Q
DO219744
CESC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.1667
p.R812Q
SIDM00881
Breast Carcinoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.1667
p.R812Q
SIDM00828
Other Sarcomas
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.1667
p.R812Q
HT-1080
soft_tissue
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.1667
p.R812Q
HCC1428
breast
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.1667
p.R822H
DO223732
CESC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.8244
p.S811Y
DO10647
COAD
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.1389
p.P818L
DO52065
HNSC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.6471
p.R823W
DO232224
PBCA
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.8634
p.S817Y
DO38039
SKCM
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.75
p.S826F
DO223907
SKCM
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.25
p.R825L
DO229272
THCA
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.S809P
DO42568
UCEC
ICGC
PTPPSS
DEG_SCF_FBW7_1
0.0833
p.S823P
SIDM00442
Thyroid Gland Carcinoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.7863
p.S823P
ML-1
thyroid
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.7863
p.R814W
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
PTPPSS
DEG_SCF_FBW7_1
0.2222
p.R814W
NCI-H2342
lung
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.2222
p.R825W
NCI-H2342
lung
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.2778
p.R823Q
HCC1428
breast
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.7329
p.R823Q
HT-1080
soft_tissue
COSMIC
PTPPSS
DEG_SCF_FBW7_1
0.7329
Drug responses associated with CHERP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPPSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40425
Pre-B-cell leukemia transcription factor 2
DEG_SCF_FBW7_1
335:340
PTPPSS
FBXW7
0.9228
More...
Q86VP3
Phosphofurin acidic cluster sorting protein 2
DEG_SCF_FBW7_1
721:726
PTPPSS
FBXW7
0.9883
More...
Q86WP2
Vasculin
DEG_SCF_FBW7_1
14:19
PTPPSS
FBXW7
0.9948
More...
Q8IWX8
Calcium homeostasis endoplasmic reticulum protein
DEG_SCF_FBW7_1
818:823
PTPPSS
FBXW7
0.9988
More...
Q9UKI8
Serine/threonine-protein kinase tousled-like 1
DEG_SCF_FBW7_1
756:761
PTPPSS
FBXW7
0.9859
More...
Q9UPS6
Histone-lysine N-methyltransferase SETD1B
DEG_SCF_FBW7_1
557:562
PTPPSS
FBXW7
0.8737
More...
Q6NV75
Probable G-protein coupled receptor 153
DEG_SCF_FBW7_1
538:543
PTPPSS
FBXW7
0.9703
More...