DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENV
Uniprot ID:
Q8N9V7
Source protein:
Protein TOPAZ1
Source gene:
TOPAZ1
Class:
DEG_APCC_KENBOX_2
Location:
731:735
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8214
ASA_SCORE:
102.26
COIL:
0.7496
CONS_SCORE:
0.6208
DSS_SCORE:
0.5225
HELIX:
0.2022
FCONS_SCORE:
1.0256
RIG_SCORE:
0.7361
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G741E
TCGA-B2-3923
KIRC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1667
p.G741E
DO18889
KIRC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.V726I
TCGA-B5-A3FA
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1944
p.V726I
DO25189
LUAD
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1944
p.V726I
DO52402
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1944
p.M738I
DO220881
MELA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.25
p.M737V
SIDM00969
Ovarian Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.2778
p.M737V
SIDM00254
Neuroblastoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.2778
p.M737V
SIDM00721
Small Cell Lung Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.2778
p.K732E
SIDM00938
Breast Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.7022
p.K732E
ACH-000902
Breast Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.7022
p.K732E
CAL-148
breast
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.7022
Drug responses associated with TOPAZ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_APCC_KENBOX_2
25:29
SKENV
APC,CDC20,FZR1
0.997
More...
Q58F21
Bromodomain testis-specific protein
DEG_APCC_KENBOX_2
683:687
SKENV
APC,CDC20,FZR1
0.9942
More...
Q6ZU35
Capping protein-inhibiting regulator of actin dynamics
DEG_APCC_KENBOX_2
1123:1127
SKENV
APC,CDC20,FZR1
0.7191
More...
Q8NI27
THO complex subunit 2
DEG_APCC_KENBOX_2
1375:1379
SKENV
APC,CDC20,FZR1
0.5524
More...
Q8TBA6
Golgin subfamily A member 5
DEG_APCC_KENBOX_2
198:202
SKENV
APC,CDC20,FZR1
0.9905
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_APCC_KENBOX_2
1525:1529
SKENV
APC,CDC20,FZR1
0.8967
More...
O95625
Zinc finger and BTB domain-containing protein 11
DEG_APCC_KENBOX_2
442:446
SKENV
APC,CDC20,FZR1
0.9903
More...
Q2T9K0
Transmembrane protein 44
DEG_APCC_KENBOX_2
450:454
SKENV
APC,CDC20,FZR1
0.6922
More...
Q8N9V7
Protein TOPAZ1
DEG_APCC_KENBOX_2
731:735
SKENV
APC,CDC20,FZR1
0.8214
More...