DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENV
Uniprot ID:
Q8NI27
Source protein:
THO complex subunit 2
Source gene:
THOC2
Class:
DEG_APCC_KENBOX_2
Location:
1375:1379
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5524
ASA_SCORE:
99.14
COIL:
0.656
CONS_SCORE:
0.2483
DSS_SCORE:
0.6832
HELIX:
0.3324
FCONS_SCORE:
0.906
RIG_SCORE:
0.6175
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1368G
TCGA-AJ-A3EK
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1389
p.D1368G
DO41584
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1389
p.M1373T
TCGA-AX-A2HD
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.2778
p.M1373T
DO42608
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.2778
p.S1388T
TCGA-D3-A8GR
SKCM
TCGA
SKENV
DEG_APCC_KENBOX_2
0.5278
p.S1388T
DO51247
SKCM
ICGC
SKENV
DEG_APCC_KENBOX_2
0.5278
p.S1388Y
TCGA-E6-A1LX
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.5278
p.S1388Y
DO41020
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.5278
p.P1386Q
TCGA-EE-A3AA
SKCM
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1389
p.P1386Q
DO37571
SKCM
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1389
p.G1382R
TCGA-FI-A2D0
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.25
p.G1382R
DO43891
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.25
p.S1375P
TCGA-HU-A4GU
STAD
TCGA
SKENV
DEG_APCC_KENBOX_2
0.5641
p.S1375P
DO47849
STAD
ICGC
SKENV
DEG_APCC_KENBOX_2
0.5641
p.E1372K
DO220857
MELA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.25
p.I1369V
SIDM00845
Burkitt's Lymphoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
SIDM00461
Acute Myeloid Leukemia
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
SIDM01519
Head and Neck Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
ACH-000786
Lymphoma
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
ACH-000992
Head and Neck Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1667
p.I1369V
ACH-001067
Brain Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1667
p.G1389A
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.0556
p.G1389A
ACH-000893
Lung Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.0556
p.G1389A
NCI-H1651
lung
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.0556
p.K1380E
SIDM00518
Mesothelioma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.3056
p.K1380E
ACH-002136
Lung Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.3056
p.K1380E
H290
pleura
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.3056
p.V1387L
SIDM00936
Bladder Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.V1387L
ACH-000142
Bladder Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1111
p.V1387L
CAL-29
urinary_tract
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.P1386S
ACH-002349
Non-Cancerous
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1389
p.R1375S
HT-1197
urinary_tract
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.7427
Drug responses associated with THOC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_APCC_KENBOX_2
25:29
SKENV
APC,CDC20,FZR1
0.997
More...
Q58F21
Bromodomain testis-specific protein
DEG_APCC_KENBOX_2
683:687
SKENV
APC,CDC20,FZR1
0.9942
More...
Q6ZU35
Capping protein-inhibiting regulator of actin dynamics
DEG_APCC_KENBOX_2
1123:1127
SKENV
APC,CDC20,FZR1
0.7191
More...
Q8NI27
THO complex subunit 2
DEG_APCC_KENBOX_2
1375:1379
SKENV
APC,CDC20,FZR1
0.5524
More...
Q8TBA6
Golgin subfamily A member 5
DEG_APCC_KENBOX_2
198:202
SKENV
APC,CDC20,FZR1
0.9905
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_APCC_KENBOX_2
1525:1529
SKENV
APC,CDC20,FZR1
0.8967
More...
O95625
Zinc finger and BTB domain-containing protein 11
DEG_APCC_KENBOX_2
442:446
SKENV
APC,CDC20,FZR1
0.9903
More...
Q2T9K0
Transmembrane protein 44
DEG_APCC_KENBOX_2
450:454
SKENV
APC,CDC20,FZR1
0.6922
More...
Q8N9V7
Protein TOPAZ1
DEG_APCC_KENBOX_2
731:735
SKENV
APC,CDC20,FZR1
0.8214
More...