DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENV
Uniprot ID:
Q9NR99
Source protein:
Matrix-remodeling-associated protein 5
Source gene:
MXRA5
Class:
DEG_APCC_KENBOX_2
Location:
1525:1529
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8967
ASA_SCORE:
72.72
COIL:
0.6014
CONS_SCORE:
0.3435
DSS_SCORE:
0.5633
HELIX:
0.0652
FCONS_SCORE:
1.1204
RIG_SCORE:
0.7162
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1517I
TCGA-BS-A0UF
UCEC
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1111
p.R1517I
DO41488
UCEC
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.E1538K
TCGA-D9-A1JW
SKCM
TCGA
SKENV
DEG_APCC_KENBOX_2
0.0833
p.E1538K
DO37786
SKCM
ICGC
SKENV
DEG_APCC_KENBOX_2
0.0833
p.N1532K
TCGA-EE-A2GO
SKCM
TCGA
SKENV
DEG_APCC_KENBOX_2
0.25
p.N1532K
DO37823
SKCM
ICGC
SKENV
DEG_APCC_KENBOX_2
0.25
p.S1515C
TCGA-HU-A4GF
STAD
TCGA
SKENV
DEG_APCC_KENBOX_2
0.0556
p.S1515C
DO47885
STAD
ICGC
SKENV
DEG_APCC_KENBOX_2
0.0556
p.S1519F
TCGA-W3-A825
SKCM
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1667
p.S1519F
DO51272
SKCM
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.Q1520E
DO229493
LAML
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1944
p.E1527K
DO222714
MELA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.7022
p.E1527K
DO229446
SKCA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.7022
p.Y1533C
SIDM01011
B-Cell Non-Hodgkin's Lymphoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.2222
p.Y1533C
KARPAS-1106P
haematopoietic_and_lymphoid_tissue
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.2222
p.F1530L
SIDM01577
Plasma Cell Myeloma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.3056
p.F1530L
ACH-000889
Myeloma
CCLE
SKENV
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with MXRA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_APCC_KENBOX_2
25:29
SKENV
APC,CDC20,FZR1
0.997
More...
Q58F21
Bromodomain testis-specific protein
DEG_APCC_KENBOX_2
683:687
SKENV
APC,CDC20,FZR1
0.9942
More...
Q6ZU35
Capping protein-inhibiting regulator of actin dynamics
DEG_APCC_KENBOX_2
1123:1127
SKENV
APC,CDC20,FZR1
0.7191
More...
Q8NI27
THO complex subunit 2
DEG_APCC_KENBOX_2
1375:1379
SKENV
APC,CDC20,FZR1
0.5524
More...
Q8TBA6
Golgin subfamily A member 5
DEG_APCC_KENBOX_2
198:202
SKENV
APC,CDC20,FZR1
0.9905
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_APCC_KENBOX_2
1525:1529
SKENV
APC,CDC20,FZR1
0.8967
More...
O95625
Zinc finger and BTB domain-containing protein 11
DEG_APCC_KENBOX_2
442:446
SKENV
APC,CDC20,FZR1
0.9903
More...
Q2T9K0
Transmembrane protein 44
DEG_APCC_KENBOX_2
450:454
SKENV
APC,CDC20,FZR1
0.6922
More...
Q8N9V7
Protein TOPAZ1
DEG_APCC_KENBOX_2
731:735
SKENV
APC,CDC20,FZR1
0.8214
More...