DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENV
Uniprot ID:
Q8TBA6
Source protein:
Golgin subfamily A member 5
Source gene:
GOLGA5
Class:
DEG_APCC_KENBOX_2
Location:
198:202
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9905
ASA_SCORE:
115.84
COIL:
0.7064
CONS_SCORE:
0.7991
DSS_SCORE:
0.7667
HELIX:
0.2694
FCONS_SCORE:
0.9894
RIG_SCORE:
0.5533
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V202L
TCGA-A8-A06Y
BRCA
TCGA
SKENV
DEG_APCC_KENBOX_2
0.5654
p.V202L
DO4872
BRCA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.5654
p.P209R
TCGA-CG-5719
STAD
TCGA
SKENV
DEG_APCC_KENBOX_2
0.1389
p.P209R
DO38827
STAD
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1389
p.S190I
DO222478
ESCA
ICGC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.K199E
SIDM00144
Non-Small Cell Lung Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.7022
p.K199E
ACH-000463
Lung Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.7022
p.K199E
NCI-H460
lung
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.7022
p.S190R
SIDM00374
B-Cell Non-Hodgkin's Lymphoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.S190R
SIDM01569
Hepatocellular Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.S190R
ACH-000734
Liver Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1111
p.S190R
ACH-002062
Lymphoma
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1111
p.S190R
SLVL
haematopoietic_and_lymphoid_tissue
COSMIC
SKENV
DEG_APCC_KENBOX_2
0.1111
p.E192D
SIDM01770
Gastric Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1667
p.E192D
ACH-000908
Gastric Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1667
p.G193V
SIDM01752
Pancreatic Carcinoma
GDSC
SKENV
DEG_APCC_KENBOX_2
0.1944
p.G193V
ACH-000685
Pancreatic Cancer
CCLE
SKENV
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with GOLGA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_APCC_KENBOX_2
25:29
SKENV
APC,CDC20,FZR1
0.997
More...
Q58F21
Bromodomain testis-specific protein
DEG_APCC_KENBOX_2
683:687
SKENV
APC,CDC20,FZR1
0.9942
More...
Q6ZU35
Capping protein-inhibiting regulator of actin dynamics
DEG_APCC_KENBOX_2
1123:1127
SKENV
APC,CDC20,FZR1
0.7191
More...
Q8NI27
THO complex subunit 2
DEG_APCC_KENBOX_2
1375:1379
SKENV
APC,CDC20,FZR1
0.5524
More...
Q8TBA6
Golgin subfamily A member 5
DEG_APCC_KENBOX_2
198:202
SKENV
APC,CDC20,FZR1
0.9905
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_APCC_KENBOX_2
1525:1529
SKENV
APC,CDC20,FZR1
0.8967
More...
O95625
Zinc finger and BTB domain-containing protein 11
DEG_APCC_KENBOX_2
442:446
SKENV
APC,CDC20,FZR1
0.9903
More...
Q2T9K0
Transmembrane protein 44
DEG_APCC_KENBOX_2
450:454
SKENV
APC,CDC20,FZR1
0.6922
More...
Q8N9V7
Protein TOPAZ1
DEG_APCC_KENBOX_2
731:735
SKENV
APC,CDC20,FZR1
0.8214
More...