DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SSSSGE
Uniprot ID:
Q86YN6
Source protein:
Peroxisome proliferator-activated receptor gamma coactivator 1-beta
Source gene:
PPARGC1B
Class:
DEG_Kelch_Keap1_1
Location:
796:801
E3 ligase:
KEAP1
DEGRON score:
0.957
ASA_SCORE:
85.25
COIL:
0.9337
CONS_SCORE:
0.5068
DSS_SCORE:
0.7914
HELIX:
0.0523
FCONS_SCORE:
1.044
RIG_SCORE:
0.4966
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L805F
TCGA-BF-AAP6
SKCM
TCGA
SSSSGE
DEG_Kelch_Keap1_1
0.2222
p.L805F
DO219470
SKCM
ICGC
SSSSGE
DEG_Kelch_Keap1_1
0.2222
p.E787K
TCGA-CF-A47X
BLCA
TCGA
SSSSGE
DEG_Kelch_Keap1_1
0.0833
p.G800D
SIDM02021
Esophageal Carcinoma
GDSC
SSSSGE
DEG_Kelch_Keap1_1
0.7198
p.Y788C
SIDM00537
Colorectal Carcinoma
GDSC
SSSSGE
DEG_Kelch_Keap1_1
0.1111
p.Y788C
ACH-000982
Colon/Colorectal Cancer
CCLE
SSSSGE
DEG_Kelch_Keap1_1
0.1111
p.Y788C
ACH-001345
Colon/Colorectal Cancer
CCLE
SSSSGE
DEG_Kelch_Keap1_1
0.1111
p.Y788C
GP5d
large_intestine
COSMIC
SSSSGE
DEG_Kelch_Keap1_1
0.1111
p.S799G
SIDM00980
Gastric Carcinoma
GDSC
SSSSGE
DEG_Kelch_Keap1_1
0.6993
p.S799G
ACH-000948
Gastric Cancer
CCLE
SSSSGE
DEG_Kelch_Keap1_1
0.6993
p.S799G
23132-87
stomach
COSMIC
SSSSGE
DEG_Kelch_Keap1_1
0.6993
p.G787E
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
SSSSGE
DEG_Kelch_Keap1_1
0.0833
Drug responses associated with PPARGC1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSSGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43365
Homeobox protein Hox-A3
DEG_Kelch_Keap1_1
172:177
SSSSGE
KEAP1
0.9946
More...
Q13023
A-kinase anchor protein 6
DEG_Kelch_Keap1_1
326:331
SSSSGE
KEAP1
0.7982
More...
Q86YN6
Peroxisome proliferator-activated receptor gamma coactivator 1-beta
DEG_Kelch_Keap1_1
796:801
SSSSGE
KEAP1
0.957
More...
Q86Z02
Homeodomain-interacting protein kinase 1
DEG_Kelch_Keap1_1
167:172
SSSSGE
KEAP1
0.5636
More...
Q92570
Nuclear receptor subfamily 4 group A member 3
DEG_Kelch_Keap1_1
284:289
SSSSGE
KEAP1
0.8454
More...
Q9P1Z0
Zinc finger and BTB domain-containing protein 4
DEG_Kelch_Keap1_1
825:830
SSSSGE
KEAP1
0.9877
More...
Q9UHD9
Ubiquilin-2
DEG_Kelch_Keap1_1
298:303
SSSSGE
KEAP1
0.9228
More...
Q2KJY2
Kinesin-like protein KIF26B
DEG_Kelch_Keap1_1
1491:1496
SSSSGE
KEAP1
0.997
More...