DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VASTS
Uniprot ID:
P55211
Source protein:
Caspase-9
Source gene:
CASP9
Class:
DEG_SPOP_SBC_1
Location:
298:302
E3 ligase:
SPOP
DEGRON score:
0.9605
ASA_SCORE:
56.18
COIL:
0.786
CONS_SCORE:
0.3276
DSS_SCORE:
0.7993
HELIX:
0.023
FCONS_SCORE:
0.609
RIG_SCORE:
0.629
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S307F
TCGA-EE-A2A2
SKCM
TCGA
VASTS
DEG_SPOP_SBC_1
0.6389
p.S307F
DO37583
SKCM
ICGC
VASTS
DEG_SPOP_SBC_1
0.6389
p.S302F
DO222363
MELA
ICGC
VASTS
DEG_SPOP_SBC_1
0.9093
p.E306K
SIDM00874
Breast Carcinoma
GDSC
VASTS
DEG_SPOP_SBC_1
0.2222
p.E306K
ACH-000223
Breast Cancer
CCLE
VASTS
DEG_SPOP_SBC_1
0.2222
p.E306K
HCC1937
breast
COSMIC
VASTS
DEG_SPOP_SBC_1
0.2222
p.S310I
ACH-000945
Lung Cancer
CCLE
VASTS
DEG_SPOP_SBC_1
0.5556
p.H293Y
G-MEL
skin
COSMIC
VASTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with CASP9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_SPOP_SBC_1
692:696
VASTS
SPOP
0.9993
More...
P55211
Caspase-9
DEG_SPOP_SBC_1
298:302
VASTS
SPOP
0.9605
More...
Q13485
Mothers against decapentaplegic homolog 4
DEG_SPOP_SBC_1
219:223
VASTS
SPOP
0.8809
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
970:974
VASTS
SPOP
0.9754
More...
Q53GL0
Pleckstrin homology domain-containing family O member 1
DEG_SPOP_SBC_1
175:179
VASTS
SPOP
0.863
More...
Q5VX71
Sushi domain-containing protein 4
DEG_SPOP_SBC_1
470:474
VASTS
SPOP
0.9726
More...
Q8TEV9
Guanine nucleotide exchange protein SMCR8
DEG_SPOP_SBC_1
681:685
VASTS
SPOP
0.9888
More...