DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VASTS
Uniprot ID:
Q53GL0
Source protein:
Pleckstrin homology domain-containing family O member 1
Source gene:
PLEKHO1
Class:
DEG_SPOP_SBC_1
Location:
175:179
E3 ligase:
SPOP
DEGRON score:
0.863
ASA_SCORE:
74.86
COIL:
0.7334
CONS_SCORE:
0.7316
DSS_SCORE:
0.5913
HELIX:
0.1438
FCONS_SCORE:
0.9517
RIG_SCORE:
0.6586
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A176S
TCGA-14-1458
GBM
TCGA
VASTS
DEG_SPOP_SBC_1
0.6477
p.L189S
TCGA-AB-2806
LAML
TCGA
VASTS
DEG_SPOP_SBC_1
0.0556
p.P167T
TCGA-D9-A148
SKCM
TCGA
VASTS
DEG_SPOP_SBC_1
0.1111
p.P167T
DO37971
SKCM
ICGC
VASTS
DEG_SPOP_SBC_1
0.1111
p.T186A
TCGA-FI-A2D5
UCEC
TCGA
VASTS
DEG_SPOP_SBC_1
0.1389
p.S187I
DO229029
LICA
ICGC
VASTS
DEG_SPOP_SBC_1
0.1111
p.T180S
SIDM01157
Other Solid Cancers
GDSC
VASTS
DEG_SPOP_SBC_1
0.3056
p.T180S
ACH-001400
Cervical Cancer
CCLE
VASTS
DEG_SPOP_SBC_1
0.3056
p.T180S
SW954
vulva
COSMIC
VASTS
DEG_SPOP_SBC_1
0.3056
p.V189E
NCI-H128
lung
COSMIC
VASTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with PLEKHO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VASTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60566
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta
DEG_SPOP_SBC_1
692:696
VASTS
SPOP
0.9993
More...
P55211
Caspase-9
DEG_SPOP_SBC_1
298:302
VASTS
SPOP
0.9605
More...
Q13485
Mothers against decapentaplegic homolog 4
DEG_SPOP_SBC_1
219:223
VASTS
SPOP
0.8809
More...
Q15652
Probable JmjC domain-containing histone demethylation protein 2C
DEG_SPOP_SBC_1
970:974
VASTS
SPOP
0.9754
More...
Q53GL0
Pleckstrin homology domain-containing family O member 1
DEG_SPOP_SBC_1
175:179
VASTS
SPOP
0.863
More...
Q5VX71
Sushi domain-containing protein 4
DEG_SPOP_SBC_1
470:474
VASTS
SPOP
0.9726
More...
Q8TEV9
Guanine nucleotide exchange protein SMCR8
DEG_SPOP_SBC_1
681:685
VASTS
SPOP
0.9888
More...