DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VCSSS
Uniprot ID:
O15016
Source protein:
Tripartite motif-containing protein 66
Source gene:
TRIM66
Class:
DEG_SPOP_SBC_1
Location:
315:319
E3 ligase:
SPOP
DEGRON score:
0.632
ASA_SCORE:
81.82
COIL:
0.8938
CONS_SCORE:
0.2609
DSS_SCORE:
0.0888
HELIX:
0.047
FCONS_SCORE:
0.6084
RIG_SCORE:
0.6726
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A312T
TCGA-AJ-A2QO
UCEC
TCGA
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312T
DO23284
LINC
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312T
DO42177
UCEC
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.C314Y
TCGA-AJ-A3BH
UCEC
TCGA
VCSSS
DEG_SPOP_SBC_1
0.3056
p.C314Y
DO41638
UCEC
ICGC
VCSSS
DEG_SPOP_SBC_1
0.3056
p.H322R
DO222990
BTCA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO229013
COCA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO229016
COCA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO229005
COCA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO229489
LAML
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO228946
LICA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.H322R
DO230929
LUSC
ICGC
VCSSS
DEG_SPOP_SBC_1
0.25
p.P311S
DO222775
MELA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.2222
p.C319Y
DO48941
PBCA
ICGC
VCSSS
DEG_SPOP_SBC_1
0.7087
p.N312T
SIDM00875
Breast Carcinoma
GDSC
VCSSS
DEG_SPOP_SBC_1
0.25
p.N312T
SIDM00954
Breast Carcinoma
GDSC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312V
JHOS-2
ovary
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312V
Sarc9371
bone
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312V
BFTC-909
kidney
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A312V
NCI-SNU-16
stomach
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.25
p.A314V
JHOS-2
ovary
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.3056
p.A314V
Sarc9371
bone
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.3056
p.A314V
BFTC-909
kidney
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.3056
p.A314V
NCI-SNU-16
stomach
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with TRIM66 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1W1
Rho guanine nucleotide exchange factor 28
DEG_SPOP_SBC_1
577:581
VCSSS
SPOP
0.9989
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SPOP_SBC_1
624:628
VCSSS
SPOP
0.9791
More...
Q9C0D2
Centrosomal protein of 295 kDa
DEG_SPOP_SBC_1
1546:1550
VCSSS
SPOP
0.8548
More...
Q9NWQ4
G patch domain-containing protein 2-like
DEG_SPOP_SBC_1
226:230
VCSSS
SPOP
0.9077
More...
Q9ULJ3
Zinc finger and BTB domain-containing protein 21
DEG_SPOP_SBC_1
282:286
VCSSS
SPOP
0.9458
More...
Q9Y6Q6
Tumor necrosis factor receptor superfamily member 11A
DEG_SPOP_SBC_1
193:197
VCSSS
SPOP
0.5093
More...
O15016
Tripartite motif-containing protein 66
DEG_SPOP_SBC_1
315:319
VCSSS
SPOP
0.632
More...