DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VCSSS
Uniprot ID:
Q9C0D2
Source protein:
Centrosomal protein of 295 kDa
Source gene:
CEP295
Class:
DEG_SPOP_SBC_1
Location:
1546:1550
E3 ligase:
SPOP
DEGRON score:
0.8548
ASA_SCORE:
78.54
COIL:
0.8434
CONS_SCORE:
0.4036
DSS_SCORE:
0.3415
HELIX:
0.1062
FCONS_SCORE:
0.9588
RIG_SCORE:
0.7052
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1560Y
SIDM00249
Esophageal Squamous Cell Carcinoma
GDSC
VCSSS
DEG_SPOP_SBC_1
0.0556
p.S1560Y
TE-15
oesophagus
COSMIC
VCSSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with CEP295 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VCSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1W1
Rho guanine nucleotide exchange factor 28
DEG_SPOP_SBC_1
577:581
VCSSS
SPOP
0.9989
More...
Q96QB1
Rho GTPase-activating protein 7
DEG_SPOP_SBC_1
624:628
VCSSS
SPOP
0.9791
More...
Q9C0D2
Centrosomal protein of 295 kDa
DEG_SPOP_SBC_1
1546:1550
VCSSS
SPOP
0.8548
More...
Q9NWQ4
G patch domain-containing protein 2-like
DEG_SPOP_SBC_1
226:230
VCSSS
SPOP
0.9077
More...
Q9ULJ3
Zinc finger and BTB domain-containing protein 21
DEG_SPOP_SBC_1
282:286
VCSSS
SPOP
0.9458
More...
Q9Y6Q6
Tumor necrosis factor receptor superfamily member 11A
DEG_SPOP_SBC_1
193:197
VCSSS
SPOP
0.5093
More...
O15016
Tripartite motif-containing protein 66
DEG_SPOP_SBC_1
315:319
VCSSS
SPOP
0.632
More...