DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VESST
Uniprot ID:
O76039
Source protein:
Cyclin-dependent kinase-like 5
Source gene:
CDKL5
Class:
DEG_SPOP_SBC_1
Location:
318:322
E3 ligase:
SPOP
DEGRON score:
0.9996
ASA_SCORE:
100.48
COIL:
0.8278
CONS_SCORE:
0.4024
DSS_SCORE:
0.684
HELIX:
0.1516
FCONS_SCORE:
1.1365
RIG_SCORE:
0.6609
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S321I
TCGA-04-1649
OV
TCGA
VESST
DEG_SPOP_SBC_1
0.7341
p.S321I
DO32467
OV
ICGC
VESST
DEG_SPOP_SBC_1
0.7341
p.G330C
TCGA-09-2044
OV
TCGA
VESST
DEG_SPOP_SBC_1
0.1111
p.G330C
DO28923
OV
ICGC
VESST
DEG_SPOP_SBC_1
0.1111
p.K314Q
TCGA-85-6561
LUSC
TCGA
VESST
DEG_SPOP_SBC_1
0.6667
p.K314Q
DO26518
LUSC
ICGC
VESST
DEG_SPOP_SBC_1
0.6667
p.R313I
TCGA-AX-A05Z
UCEC
TCGA
VESST
DEG_SPOP_SBC_1
0.1944
p.R313I
DO40884
UCEC
ICGC
VESST
DEG_SPOP_SBC_1
0.1944
p.A311S
TCGA-CV-5978
HNSC
TCGA
VESST
DEG_SPOP_SBC_1
0.1389
p.A311S
DO16023
HNSC
ICGC
VESST
DEG_SPOP_SBC_1
0.1389
p.T322A
TCGA-EY-A215
UCEC
TCGA
VESST
DEG_SPOP_SBC_1
0.7139
p.T322A
DO42665
UCEC
ICGC
VESST
DEG_SPOP_SBC_1
0.7139
p.V318M
TCGA-F5-6571
READ
TCGA
VESST
DEG_SPOP_SBC_1
0.7208
p.V318M
DO36874
READ
ICGC
VESST
DEG_SPOP_SBC_1
0.7208
p.P315L
TCGA-FI-A2D0
UCEC
TCGA
VESST
DEG_SPOP_SBC_1
0.25
p.P315L
DO43891
UCEC
ICGC
VESST
DEG_SPOP_SBC_1
0.25
p.A311T
SIDM00602
Gastric Carcinoma
GDSC
VESST
DEG_SPOP_SBC_1
0.1389
p.A311T
ACH-000919
Gastric Cancer
CCLE
VESST
DEG_SPOP_SBC_1
0.1389
p.A311T
IM-95
stomach
COSMIC
VESST
DEG_SPOP_SBC_1
0.1389
p.S321N
SIDM00329
Hodgkin's Lymphoma
GDSC
VESST
DEG_SPOP_SBC_1
0.7069
p.S321N
ACH-000806
Lymphoma
CCLE
VESST
DEG_SPOP_SBC_1
0.7069
p.S321N
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
VESST
DEG_SPOP_SBC_1
0.7069
Drug responses associated with CDKL5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O76039
Cyclin-dependent kinase-like 5
DEG_SPOP_SBC_1
318:322
VESST
SPOP
0.9996
More...
P49321
Nuclear autoantigenic sperm protein
DEG_SPOP_SBC_1
675:679
VESST
SPOP
0.842
More...
Q6R327
Rapamycin-insensitive companion of mTOR
DEG_SPOP_SBC_1
1205:1209
VESST
SPOP
0.9971
More...
Q6ZTR5
Cilia- and flagella-associated protein 47
DEG_SPOP_SBC_1
2013:2017
VESST
SPOP
0.7453
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
581:585
VESST
SPOP
0.9759
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
23:27
VESST
SPOP
0.9811
More...
Q9H8J5
MANSC domain-containing protein 1
DEG_SPOP_SBC_1
346:350
VESST
SPOP
0.9938
More...