DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VESST
Uniprot ID:
Q9C0D7
Source protein:
Probable ribonuclease ZC3H12C
Source gene:
ZC3H12C
Class:
DEG_SPOP_SBC_1
Location:
23:27
E3 ligase:
SPOP
DEGRON score:
0.9811
ASA_SCORE:
71.28
COIL:
0.6836
CONS_SCORE:
0.402
DSS_SCORE:
0.433
HELIX:
0.256
FCONS_SCORE:
1.1051
RIG_SCORE:
0.728
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F31L
TCGA-92-8063
LUSC
TCGA
VESST
DEG_SPOP_SBC_1
0.2222
p.R28C
TCGA-EO-A22R
UCEC
TCGA
VESST
DEG_SPOP_SBC_1
0.3056
p.L34V
TCGA-L5-A8NE
ESCA
TCGA
VESST
DEG_SPOP_SBC_1
0.1389
p.D20G
DO233766
GACA
ICGC
VESST
DEG_SPOP_SBC_1
0.25
p.W29L
DO218944
LUAD
ICGC
VESST
DEG_SPOP_SBC_1
0.2778
p.F32L
DO26941
LUSC
ICGC
VESST
DEG_SPOP_SBC_1
0.1944
p.L14I
DO43306
UCEC
ICGC
VESST
DEG_SPOP_SBC_1
0.0833
p.R29C
DO42713
UCEC
ICGC
VESST
DEG_SPOP_SBC_1
0.2778
p.Q15H
SIDM01158
Squamous Cell Lung Carcinoma
GDSC
VESST
DEG_SPOP_SBC_1
0.1111
p.Q15H
SW900
lung
COSMIC
VESST
DEG_SPOP_SBC_1
0.1111
p.N30S
SIDM01335
Kidney Carcinoma
GDSC
VESST
DEG_SPOP_SBC_1
0.25
p.N30S
SIDM01394
Kidney Carcinoma
GDSC
VESST
DEG_SPOP_SBC_1
0.25
p.Q16H
ACH-000669
Lung Cancer
CCLE
VESST
DEG_SPOP_SBC_1
0.1389
p.Q16H
SW900
lung
COSMIC
VESST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with ZC3H12C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VESST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O76039
Cyclin-dependent kinase-like 5
DEG_SPOP_SBC_1
318:322
VESST
SPOP
0.9996
More...
P49321
Nuclear autoantigenic sperm protein
DEG_SPOP_SBC_1
675:679
VESST
SPOP
0.842
More...
Q6R327
Rapamycin-insensitive companion of mTOR
DEG_SPOP_SBC_1
1205:1209
VESST
SPOP
0.9971
More...
Q6ZTR5
Cilia- and flagella-associated protein 47
DEG_SPOP_SBC_1
2013:2017
VESST
SPOP
0.7453
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
581:585
VESST
SPOP
0.9759
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
23:27
VESST
SPOP
0.9811
More...
Q9H8J5
MANSC domain-containing protein 1
DEG_SPOP_SBC_1
346:350
VESST
SPOP
0.9938
More...