DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVTST
Uniprot ID:
Q8NFC6
Source protein:
Biorientation of chromosomes in cell division protein 1-like 1
Source gene:
BOD1L1
Class:
DEG_SPOP_SBC_1
Location:
1870:1874
E3 ligase:
SPOP
DEGRON score:
0.9754
ASA_SCORE:
79.26
COIL:
0.6576
CONS_SCORE:
0.6467
DSS_SCORE:
0.7127
HELIX:
0.0376
FCONS_SCORE:
1.1251
RIG_SCORE:
0.7371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1869Y
TCGA-55-8299
LUAD
TCGA
VVTST
DEG_SPOP_SBC_1
0.3056
p.D1869Y
DO25927
LUAD
ICGC
VVTST
DEG_SPOP_SBC_1
0.3056
p.E1879K
TCGA-66-2768
LUSC
TCGA
VVTST
DEG_SPOP_SBC_1
0.1944
p.E1879K
DO50970
LICA
ICGC
VVTST
DEG_SPOP_SBC_1
0.1944
p.E1879K
DO27216
LUSC
ICGC
VVTST
DEG_SPOP_SBC_1
0.1944
p.G1881V
TCGA-99-AA5R
LUAD
TCGA
VVTST
DEG_SPOP_SBC_1
0.1389
p.G1881V
DO51203
LUAD
ICGC
VVTST
DEG_SPOP_SBC_1
0.1389
p.G1867R
TCGA-EE-A2GJ
SKCM
TCGA
VVTST
DEG_SPOP_SBC_1
0.25
p.G1867R
DO37746
SKCM
ICGC
VVTST
DEG_SPOP_SBC_1
0.25
p.S1873N
TCGA-ZF-A9RM
BLCA
TCGA
VVTST
DEG_SPOP_SBC_1
0.7069
p.S1873N
DO219079
BLCA
ICGC
VVTST
DEG_SPOP_SBC_1
0.7069
p.T1872S
ACH-001853
Bile Duct Cancer
CCLE
VVTST
DEG_SPOP_SBC_1
0.6005
Drug responses associated with BOD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15408
Fos-related antigen 2
DEG_SPOP_SBC_1
266:270
VVTST
SPOP
0.9977
More...
P25940
Collagen alpha-3
DEG_SPOP_SBC_1
306:310
VVTST
SPOP
0.9957
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2546:2550
VVTST
SPOP
0.7708
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1870:1874
VVTST
SPOP
0.9754
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
15779:15783
VVTST
SPOP
0.5021
More...
Q96L42
Potassium voltage-gated channel subfamily H member 8
DEG_SPOP_SBC_1
1092:1096
VVTST
SPOP
0.7903
More...
Q9P266
Junctional protein associated with coronary artery disease
DEG_SPOP_SBC_1
1181:1185
VVTST
SPOP
0.6941
More...