Search results: The pahtway p4076 has 59 genes in the original annotation. Currently, there are 35 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
3784KCNQ1ATFB1 | ATFB3 | JLNS1 | KCNA8 | KCNA9 | KVLQT1 | Kv1.9 | Kv7.1 | LQT | LQT1 | RWS | SQT2 | WRSpotassium voltage-gated channel subfamily Q member 111p15.5CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
PMID:cooccur
1280COL2A1ANFH | AOM | COL11A3 | SEDC | STL1collagen type II alpha 112q13.11CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
8600TNFSF11CD254 | ODF | OPGL | OPTB2 | RANKL | TNLG6B | TRANCE | hRANKL2 | sOdftumor necrosis factor superfamily member 1113q14CV:PGCnp
DMG:Wockner_2014
Network
3169FOXA1HNF3A | TCF3Aforkhead box A114q21.1CV:PGCnp
DMG:Wockner_2014
1381CRABP1CRABP | CRABP-I | CRABPI | RBP5cellular retinoic acid binding protein 115q24CV:PGCnp
176ACANAGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDKaggrecan15q26.1CV:PGCnpG2Cdb.human_mGluR5
644815FAM83GPAWS1family with sequence similarity 83 member G17p11.2CV:PGCnpAscano FMRP targets
6532SLC6A45-HTT | 5-HTTLPR | 5HTT | HTT | OCD1 | SERT | SERT1 | hSERTsolute carrier family 6 member 417q11.2ADT:Sun_2012
Association
Core
CV:PGCnp
GO_Annotation
GR_COR
GR_Ng
GR_WM
PMID:cooccur
NEUROTRANSMITTER METABOLISM
SEROTONIN
78995C17orf53-chromosome 17 open reading frame 5317q21.31CV:PGCnp
DMG:Jaffe_2016
7484WNT9BWNT14B | WNT15wingless-type MMTV integration site family member 9B17q21.32CV:PGCnp
326624RAB37-RAB37, member RAS oncogene family17q25.1CV:PheWAS
DMG:Wockner_2014
G2Cdb.humanNRC
G2Cdb.humanPSP
8877SPHK1SPHKsphingosine kinase 117q25.2CV:PGCnp
8811GALR2GAL2-R | GALNR2 | GALR-2galanin receptor 217q25.3GO_Annotation
PMID:cooccur
1311COMPEDM1 | EPD1 | MED | PSACH | THBS5cartilage oligomeric matrix protein19p13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
8463TEAD2ETF | TEAD-2 | TEF-4 | TEF4TEA domain transcription factor 219q13.3DMG:Wockner_2014
255231MCOLN2TRP-ML2 | TRPML2mucolipin 21p22CV:PGCnp
23566LPAR3EDG7 | Edg-7 | GPCR | HOFNH30 | LP-A3 | LPA3 | RP4-678I3lysophosphatidic acid receptor 31p22.3CV:GWASdb
CV:PGCnp
DNM:Fromer_2014
Expression
GO_Annotation
CompositeSet
9048ARTNENOVIN | EVN | NBNartemin1p34.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
353500BMP8A-bone morphogenetic protein 8a1p34.3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
6920TCEA3TFIIS | TFIIS.Htranscription elongation factor A31p36.12CV:GWASdb
CV:PGCnp
5020OXTOT | OT-NPI | OXT-NPIoxytocin/neurophysin I prepropeptide20p13CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
Potential synaptic genes
3055HCKJTK9 | p59Hck | p61HckHCK proto-oncogene, Src family tyrosine kinase20q11-q12CV:PGCnp
Network
CompositeSet
7113TMPRSS2PP9284 | PRSS10transmembrane protease, serine 221q22.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
3549IHHBDA1 | HHG2indian hedgehog2q33-q35CV:PGCnp
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
152573SHISA3hShisa3shisa family member 34p13CV:PGCnp
DMG:Wockner_2014
94031HTRA3Prsp | TaspHtrA serine peptidase 34p16.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
5308PITX2ARP1 | Brx1 | IDG2 | IGDS | IGDS2 | IHG2 | IRID2 | Otlx2 | PTX2 | RGS | RIEG | RIEG1 | RSpaired like homeodomain 24q25CV:PGCnp
PMID:cooccur
5480PPICCYPCpeptidylprolyl isomerase C5q23.2CV:PGCnp
PMID:cooccur
6954TCP11D6S230E | FPPRt-complex 116p21.31CV:PGCnp
GSMA_I
GSMA_IIE
245806VGLL2VGL2 | VITO1vestigial like family member 26q22.1CV:PGCnp
DMG:Wockner_2014
3198HOXA1BSAS | HOX1 | HOX1Fhomeobox A17p15.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7291TWIST1ACS3 | BPES2 | BPES3 | CRS | CRS1 | CSO | SCS | TWIST | bHLHa38twist family bHLH transcription factor 17p21.2CV:GWASdb
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
392255GDF6BMP-13 | BMP13 | CDMP2 | KFM | KFS | KFS1 | KFSL | LCA17 | MCOP4 | MCOPCB6 | SCDO4 | SGM1growth differentiation factor 68q22.1CV:PGCnp
DMG:Jaffe_2016
8013NR4A3CHN | CSMF | MINOR | NOR1 | TECnuclear receptor subfamily 4 group A member 39q22CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
26468LHX6LHX6.1LIM homeobox 69q33.2DNM:Fromer_2014
GO_Annotation
PMID:cooccur
CompositeSet