Gene set: GSMA_I

     Gene set description
  • Gene set name: GSMA_I
  • Method: genome scan meta-analysis
  • Number of genes: 2155
  • Reference: Lewis et al. (2003) Genome Scan Meta-Analysis of Schizophrenia and Bipolar Disorder, Part II: Schizophrenia. The American Journal of Human Genetics 73(1): 34 - 48 PubMed
  • Gene set summary: The GSMA_I gene set includes 2158 genes from 12 bins having both PAvgRnk and Pord <0.05 in Lewis et al. (2003) genome scan meta-analysis.
     Gene List

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Gene ID Symbol Official Full Name Start Site End Site Location
54734RAB39RAB39, member RAS oncogene family107304487107339418-
80975TMPRSS5transmembrane protease, serine 511306348311308230511q
64776C11orf1chromosome 11 open reading frame 111125515811126000811q13-q22
54494C11orf71chromosome 11 open reading frame 7111377500311377644311q14.2-q14.3
2977GUCY1A2guanylate cyclase 1, soluble, alpha 210606312010639438111q21-q22
60496AASDHPPTaminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase10545350210547462911q22
2230FDX1ferredoxin 110980580410984081511q22
2893GRIA4glutamate receptor, ionotrophic, AMPA 410498601010535802911q22
84437KIAA1826KIAA182610538383910539816411q22
56158TEX12testis expressed 1211154330511154848911q22
472ATMataxia telangiectasia mutated10759876910774503611q22-q23
56253CRTAMcytotoxic and regulatory T cell molecule12221446512224855711q22-q23
8065CUL5cullin 510738461810748369811q22-q23
1662DDX10DEAD (Asp-Glu-Ala-Asp) box polypeptide 1010804102610831686011q22-q23
3316HSPB2heat shock 27kDa protein 211128870911129002711q22-q23
4863NPATnuclear protein, ataxia-telangiectasia locus10753332710759857511q22-q23
6588SLNsarcolipin10708331110708799711q22-q23
23650TRIM29tripartite motif-containing 2911948720411951407311q22-q23
7007TECTAtectorin alpha12047858512056672511q22-q24
837CASP4caspase 4, apoptosis-related cysteine peptidase10431880410434453511q22.2-q22.3
838CASP5caspase 5, apoptosis-related cysteine peptidase10437018010438490911q22.2-q22.3
3606IL18interleukin 18 (interferon-gamma-inducing factor)11151918611154005011q22.2-q22.3
91801ALKBH8alkB, alkylation repair homolog 8 (E. coli)10688054110694163711q22.3
160140C11orf65chromosome 11 open reading frame 6510775893710784346811q22.3
143884CWF19L2CWF19-like 2, cell cycle control (S. pombe)10670229310683040611q22.3
55531ELMOD1ELMO/CED-12 domain containing 110696728410704271511q22.3
23086EXPH5exophilin 510788488610796957011q22.3
2900GRIK4glutamate receptor, ionotropic, kainate 412003623812036217911q22.3
143879KBTBD3kelch repeat and BTB (POZ) domain containing 310542703510545339611q22.3
143888KDELC2KDEL (Lys-Asp-Glu-Leu) containing 210784804310787436911q22.3
643923LOC643923hypothetical protein LOC64392310696768110696915911q22.3
54733SLC35F2solute carrier family 35, member F210716692710723486411q22.3
85463ZC3H12Czinc finger CCCH-type containing 12C10946929710954777611q22.3
7070THY1Thy-1 cell surface antigen11879409811879906411q22.3-q23
38ACAT1acetyl-Coenzyme A acetyltransferase 110749746810752348511q22.3-q23.1
57569ARHGAP20Rho GTPase activating protein 2010995297611008866111q22.3-q23.1
1410CRYABcrystallin, alpha B11128456011128768311q22.3-q23.1
5805PTS6-pyruvoyltetrahydropterin synthase11160230911160990311q22.3-q23.3
79796ALG9asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)11115812911124751511q23
337APOA4apolipoprotein A-IV11619662811619922111q23
116519APOA5apolipoprotein A-V11616529611616779411q23
54766BTG4B-cell translocation gene 411084346511088827411q23
834CASP1caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)10440144510441106711q23
915CD3DCD3d molecule, delta (CD3-TCR complex)11771499911771866911q23
916CD3ECD3e molecule, epsilon (CD3-TCR complex)11768066211769210011q23
917CD3GCD3g molecule, gamma (CD3-TCR complex)11772031111772926111q23
1813DRD2dopamine receptor D211278552711285109111q23
57453DSCAML1Down syndrome cell adhesion molecule like 111680369911717318611q23
486FXYD2FXYD domain containing ion transport regulator 211719600011720401711q23
3587IL10RAinterleukin 10 receptor, alpha11736231911737740411q23
83552MFRPmembrane frizzled-related protein11871683611872258011q23
4297MLLmyeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)11781241511790114611q23
5049PAFAH1B2platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa11652025011654402411q23
5962RDXradixin10960537610967264711q23
79102RNF26ring finger protein 2611871044711871323211q23
6327SCN2Bsodium channel, voltage-gated, type II, beta11753872911755254611q23
6392SDHDsuccinate dehydrogenase complex, subunit D, integral membrane protein11146283211147172711q23
84000TMPRSS13transmembrane protease, serine 1311727657011730532511q23
7379UPK2uroplakin 211833223611833447911q23
57646USP28ubiquitin specific peptidase 2811317380711325146611q23
55823VPS11vacuolar protein sorting 11 homolog (S. cerevisiae)11844370311845789811q23
335APOA1apolipoprotein A-I11621167911621354811q23-q24
9159PCSK7proprotein convertase subtilisin/kexin type 711658099811660802111q23-q24
255239ANKK1ankyrin repeat and kinase domain containing 111276372311277635011q23.1
91894C11orf52chromosome 11 open reading frame 5211129481111130280511q23.1
341032C11orf53chromosome 11 open reading frame 5311063191711066218311q23.1
55216C11orf57chromosome 11 open reading frame 5711145017811146108411q23.1
85458DIXDC1DIX domain containing 111131313711139851811q23.1
1737DLATdihydrolipoamide S-acetyltransferase11140138111143979911q23.1
399948FLJ45803FLJ45803 protein11066938011067574911q23.1
3359HTR3A5-hydroxytryptamine (serotonin) receptor 3A11335112011336624511q23.1
9177HTR3B5-hydroxytryptamine (serotonin) receptor 3B11328079911332249311q23.1
143903LAYNlayilin11091644311093699811q23.1
4684NCAM1neural cell adhesion molecule 111233720511265436811q23.1
4837NNMTnicotinamide N-methyltransferase11367174511368844811q23.1
120379PIH1D2PIH1 domain containing 211143994411145010511q23.1
5450POU2AF1POU class 2 associating factor 111072819011075562611q23.1
23235SNF1LK2SNF1-like kinase 211097838011110284511q23.1
54970TTC12tetratricopeptide repeat domain 1211269046111274232411q23.1
7704ZBTB16zinc finger and BTB domain containing 1611343564111362660811q23.1
345APOC3apolipoprotein C-III11620583411620899711q23.1-q23.2
10179RBM7RNA binding motif protein 711377659411378484511q23.1-q23.2
25996REXO2REX2, RNA exonuclease 2 homolog (S. cerevisiae)11381538711382621111q23.1-q23.2
26521TIMM8Btranslocase of inner mitochondrial membrane 8 homolog B (yeast)11146107911146266911q23.1-q23.2
10525HYOU1hypoxia up-regulated 111842011011843312211q23.1-q23.3
23705CADM1cell adhesion molecule 111454955511488045111q23.2
120400FAM55Afamily with sequence similarity 55, member A11389764711393579011q23.2
54827FAM55Dfamily with sequence similarity 55, member D11394652311397169411q23.2
5519PPP2R1Bprotein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform11110284211114237911q23.2
6876TAGLNtransgelin11657525011658071811q23.2
9183ZW10ZW10, kinetochore associated, homolog (Drosophila)11310911911314963511q23.2
23621BACE1beta-site APP-cleaving enzyme 111666162411669218211q23.2-q23.3
3014H2AFXH2A histone family, member X11846979411847138711q23.2-q23.3
6653SORL1sortilin-related receptor, L(DLR class) A repeats-containing12082813012100562111q23.2-q24.2
64137ABCG4ATP-binding cassette, sub-family G (WHITE), member 411852496011853858511q23.3
120425AMICA1adhesion molecule, interacts with CXADR antigen 111756965211760101911q23.3
372ARCN1archain 111794832111797885511q23.3
23365ARHGEF12Rho guanine nucleotide exchange factor (GEF) 1211971315611986585511q23.3
10632ATP5LATP synthase, H+ transporting, mitochondrial F0 complex, subunit G11777731411778577211q23.3
283149BCL9LB-cell CLL/lymphoma 9-like11827205911828682311q23.3

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