DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ADTTT
Uniprot ID:
O00592
Source protein:
Podocalyxin
Source gene:
PODXL
Class:
DEG_SPOP_SBC_1
Location:
129:133
E3 ligase:
SPOP
DEGRON score:
0.8638
ASA_SCORE:
90.46
COIL:
0.881
CONS_SCORE:
0.3404
DSS_SCORE:
0.5958
HELIX:
0.0358
FCONS_SCORE:
0.9601
RIG_SCORE:
0.6969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E121K
TCGA-EE-A3AB
SKCM
TCGA
ADTTT
DEG_SPOP_SBC_1
0.1111
p.I120N
TCGA-VQ-A8E3
STAD
TCGA
ADTTT
DEG_SPOP_SBC_1
0.0833
p.T128A
DO48368
BLCA
ICGC
ADTTT
DEG_SPOP_SBC_1
0.75
p.A141D
DO229028
LICA
ICGC
ADTTT
DEG_SPOP_SBC_1
0.1111
p.K129N
DO52304
LIHC
ICGC
ADTTT
DEG_SPOP_SBC_1
0.6918
p.E123K
DO222670
MELA
ICGC
ADTTT
DEG_SPOP_SBC_1
0.1667
p.E123K
DO38057
SKCM
ICGC
ADTTT
DEG_SPOP_SBC_1
0.1667
p.I122N
DO51759
STAD
ICGC
ADTTT
DEG_SPOP_SBC_1
0.5833
p.I120T
SIDM00607
Glioblastoma
GDSC
ADTTT
DEG_SPOP_SBC_1
0.0833
p.I120T
SIDM00083
Glioblastoma
GDSC
ADTTT
DEG_SPOP_SBC_1
0.0833
p.I120T
ACH-000622
Brain Cancer
CCLE
ADTTT
DEG_SPOP_SBC_1
0.0833
p.I120T
KNS-42
central_nervous_system
COSMIC
ADTTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with PODXL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADTTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00592
Podocalyxin
DEG_SPOP_SBC_1
129:133
ADTTT
SPOP
0.8638
More...
O60885
Bromodomain-containing protein 4
DEG_SPOP_SBC_1
292:296
ADTTT
SPOP
0.9991
More...
P25440
Bromodomain-containing protein 2
DEG_SPOP_SBC_1
283:287
ADTTT
SPOP
0.9945
More...
P39060
Collagen alpha-1
DEG_SPOP_SBC_1
58:62
ADTTT
SPOP
0.8165
More...
Q15059
Bromodomain-containing protein 3
DEG_SPOP_SBC_1
246:250
ADTTT
SPOP
0.9976
More...
Q58F21
Bromodomain testis-specific protein
DEG_SPOP_SBC_1
215:219
ADTTT
SPOP
0.9952
More...
Q6ZVD8
PH domain leucine-rich repeat-containing protein phosphatase 2
DEG_SPOP_SBC_1
38:42
ADTTT
SPOP
0.9983
More...
Q9H9B1
Histone-lysine N-methyltransferase EHMT1
DEG_SPOP_SBC_1
667:671
ADTTT
SPOP
0.9939
More...
Q8N9M1
Uncharacterized protein C19orf47
DEG_SPOP_SBC_1
251:255
ADTTT
SPOP
0.9047
More...