DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AGSTT
Uniprot ID:
P52951
Source protein:
Homeobox protein GBX-2
Source gene:
GBX2
Class:
DEG_SPOP_SBC_1
Location:
238:242
E3 ligase:
SPOP
DEGRON score:
0.9792
ASA_SCORE:
77.18
COIL:
0.941
CONS_SCORE:
0.5335
DSS_SCORE:
0.7916
HELIX:
0.0426
FCONS_SCORE:
0.8701
RIG_SCORE:
0.531
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R250W
TCGA-XK-AAIW
PRAD
TCGA
AGSTT
DEG_SPOP_SBC_1
0.1111
p.R250W
DO51407
PRAD
ICGC
AGSTT
DEG_SPOP_SBC_1
0.1111
p.R250W
ACH-001610
Brain Cancer
CCLE
AGSTT
DEG_SPOP_SBC_1
0.1111
p.R251Q
DO48374
BLCA
ICGC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.R249W
DO233624
GACA
ICGC
AGSTT
DEG_SPOP_SBC_1
0.1389
p.R249Q
DO227835
PBCA
ICGC
AGSTT
DEG_SPOP_SBC_1
0.1389
p.A237T
SIDM00111
Glioma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.3056
p.A237T
SIDM00527
Colorectal Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.3056
p.A237T
U251
central_nervous_system
COSMIC
AGSTT
DEG_SPOP_SBC_1
0.3056
p.A237T
MDST8
large_intestine
COSMIC
AGSTT
DEG_SPOP_SBC_1
0.3056
p.R251G
SIDM00196
Ewing's Sarcoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.R251G
ACH-002116
Bone Cancer
CCLE
AGSTT
DEG_SPOP_SBC_1
0.0833
p.R251G
EW-22
bone
COSMIC
AGSTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with GBX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P52951
Homeobox protein GBX-2
DEG_SPOP_SBC_1
238:242
AGSTT
SPOP
0.9792
More...
Q6WN34
Chordin-like protein 2
DEG_SPOP_SBC_1
235:239
AGSTT
SPOP
0.9287
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
491:495
AGSTT
SPOP
0.9844
More...
Q9BQF6
Sentrin-specific protease 7
DEG_SPOP_SBC_1
387:391
AGSTT
SPOP
0.9925
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1480:1484
AGSTT
SPOP
0.9785
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
765:769
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
1820:1824
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
3377:3381
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4460:4464
AGSTT
SPOP
0.9616
More...
Q9UPV0
Centrosomal protein of 164 kDa
DEG_SPOP_SBC_1
1404:1408
AGSTT
SPOP
0.8025
More...