DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AGSTT
Uniprot ID:
Q6WN34
Source protein:
Chordin-like protein 2
Source gene:
CHRDL2
Class:
DEG_SPOP_SBC_1
Location:
235:239
E3 ligase:
SPOP
DEGRON score:
0.9287
ASA_SCORE:
62.62
COIL:
0.7882
CONS_SCORE:
0.4835
DSS_SCORE:
0.4795
HELIX:
0.036
FCONS_SCORE:
1.0309
RIG_SCORE:
0.6788
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G236C
TCGA-92-7340
LUSC
TCGA
AGSTT
DEG_SPOP_SBC_1
0.6489
p.G236C
DO26775
LUSC
ICGC
AGSTT
DEG_SPOP_SBC_1
0.6489
p.G234R
TCGA-DX-A8BP
SARC
TCGA
AGSTT
DEG_SPOP_SBC_1
0.3056
p.G234R
DO220056
SARC
ICGC
AGSTT
DEG_SPOP_SBC_1
0.3056
p.K233N
TCGA-EE-A20F
SKCM
TCGA
AGSTT
DEG_SPOP_SBC_1
0.2778
p.K233N
DO37961
SKCM
ICGC
AGSTT
DEG_SPOP_SBC_1
0.2778
p.K249E
TCGA-FR-A7U9
SKCM
TCGA
AGSTT
DEG_SPOP_SBC_1
0.1667
p.K249E
DO48546
SKCM
ICGC
AGSTT
DEG_SPOP_SBC_1
0.1667
p.R231K
DO231027
LUSC
ICGC
AGSTT
DEG_SPOP_SBC_1
0.2222
p.P232L
DO222653
MELA
ICGC
AGSTT
DEG_SPOP_SBC_1
0.25
p.I226T
SIDM00545
Melanoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226T
ACH-000987
Skin Cancer
CCLE
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226T
Mewo
skin
COSMIC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00773
Non-Cancerous
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM01090
Colorectal Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00210
Ovarian Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00529
Breast Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00971
Breast Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00493
Other Solid Cancers
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00875
Breast Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00309
Mesothelioma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00774
Breast Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00257
Neuroblastoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
p.I226V
SIDM00760
Small Cell Lung Carcinoma
GDSC
AGSTT
DEG_SPOP_SBC_1
0.0833
Drug responses associated with CHRDL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P52951
Homeobox protein GBX-2
DEG_SPOP_SBC_1
238:242
AGSTT
SPOP
0.9792
More...
Q6WN34
Chordin-like protein 2
DEG_SPOP_SBC_1
235:239
AGSTT
SPOP
0.9287
More...
Q6ZSZ6
Teashirt homolog 1
DEG_SPOP_SBC_1
491:495
AGSTT
SPOP
0.9844
More...
Q9BQF6
Sentrin-specific protease 7
DEG_SPOP_SBC_1
387:391
AGSTT
SPOP
0.9925
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1480:1484
AGSTT
SPOP
0.9785
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
765:769
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
1820:1824
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
3377:3381
AGSTT
SPOP
0.9616
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
4460:4464
AGSTT
SPOP
0.9616
More...
Q9UPV0
Centrosomal protein of 164 kDa
DEG_SPOP_SBC_1
1404:1408
AGSTT
SPOP
0.8025
More...