DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AKSTS
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_SPOP_SBC_1
Location:
1951:1955
E3 ligase:
SPOP
DEGRON score:
0.8024
ASA_SCORE:
73.58
COIL:
0.7396
CONS_SCORE:
0.3958
DSS_SCORE:
0.294
HELIX:
0.176
FCONS_SCORE:
0.9253
RIG_SCORE:
0.7363
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1965Y
TCGA-B5-A1MR
UCEC
TCGA
AKSTS
DEG_SPOP_SBC_1
0.0556
p.D1965Y
DO41758
UCEC
ICGC
AKSTS
DEG_SPOP_SBC_1
0.0556
p.T1954I
TCGA-ZM-AA0D
TGCT
TCGA
AKSTS
DEG_SPOP_SBC_1
0.8189
p.F1961C
DO222285
GACA
ICGC
AKSTS
DEG_SPOP_SBC_1
0.1667
p.T1954S
DO49150
PACA
ICGC
AKSTS
DEG_SPOP_SBC_1
0.7116
p.F1961I
SIDM00889
Cervical Carcinoma
GDSC
AKSTS
DEG_SPOP_SBC_1
0.1667
p.F1961I
ACH-001333
Cervical Cancer
CCLE
AKSTS
DEG_SPOP_SBC_1
0.1667
p.F1961I
C-33-A
cervix
COSMIC
AKSTS
DEG_SPOP_SBC_1
0.1667
p.K1963I
SIDM00999
Bladder Carcinoma
GDSC
AKSTS
DEG_SPOP_SBC_1
0.5556
p.K1963I
ACH-000973
Bladder Cancer
CCLE
AKSTS
DEG_SPOP_SBC_1
0.5556
p.K1963I
639-V
urinary_tract
COSMIC
AKSTS
DEG_SPOP_SBC_1
0.5556
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_SPOP_SBC_1
1951:1955
AKSTS
SPOP
0.8024
More...
P58304
Visual system homeobox 2
DEG_SPOP_SBC_1
18:22
AKSTS
SPOP
0.9689
More...
Q13480
GRB2-associated-binding protein 1
DEG_SPOP_SBC_1
204:208
AKSTS
SPOP
0.7361
More...
Q8WWL2
Protein spire homolog 2
DEG_SPOP_SBC_1
383:387
AKSTS
SPOP
0.6134
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
438:442
AKSTS
SPOP
0.9731
More...
A6NKT7
RanBP2-like and GRIP domain-containing protein 3
DEG_SPOP_SBC_1
976:980
AKSTS
SPOP
0.8902
More...
P0DJD0
RANBP2-like and GRIP domain-containing protein 1
DEG_SPOP_SBC_1
960:964
AKSTS
SPOP
0.9976
More...
P0DJD1
RANBP2-like and GRIP domain-containing protein 2
DEG_SPOP_SBC_1
968:972
AKSTS
SPOP
0.9478
More...
Q569K6
Coiled-coil domain-containing protein 157
DEG_SPOP_SBC_1
643:647
AKSTS
SPOP
0.7532
More...