DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTS
Uniprot ID:
A4D1E9
Source protein:
GTP-binding protein 10
Source gene:
GTPBP10
Class:
DEG_SPOP_SBC_1
Location:
378:382
E3 ligase:
SPOP
DEGRON score:
0.8328
ASA_SCORE:
52.38
COIL:
0.3894
CONS_SCORE:
0.2135
DSS_SCORE:
0.6777
HELIX:
0.0612
FCONS_SCORE:
0.9934
RIG_SCORE:
0.7383
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A378D
TCGA-AP-A051
UCEC
TCGA
AVTTS
DEG_SPOP_SBC_1
0.7793
p.A378D
DO42673
UCEC
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7793
p.M368I
DO228483
BRCA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.0556
p.M368I
DO229013
COCA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.0556
p.M368I
DO234205
ESAD
ICGC
AVTTS
DEG_SPOP_SBC_1
0.0556
p.M368I
DO229047
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with GTPBP10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D1E9
GTP-binding protein 10
DEG_SPOP_SBC_1
378:382
AVTTS
SPOP
0.8328
More...
O15042
U2 snRNP-associated SURP motif-containing protein
DEG_SPOP_SBC_1
773:777
AVTTS
SPOP
0.9929
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
2240:2244
AVTTS
SPOP
0.9879
More...
Q2NKQ1
Small G protein signaling modulator 1
DEG_SPOP_SBC_1
906:910
AVTTS
SPOP
0.9012
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
702:706
AVTTS
SPOP
0.7279
More...
Q8TEW8
Partitioning defective 3 homolog B
DEG_SPOP_SBC_1
616:620
AVTTS
SPOP
0.734
More...
Q9UKM9
RNA-binding protein Raly
DEG_SPOP_SBC_1
172:176
AVTTS
SPOP
0.9427
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
422:426
AVTTS
SPOP
0.8621
More...