DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
AVTTS
Uniprot ID:
Q9UKM9
Source protein:
RNA-binding protein Raly
Source gene:
RALY
Class:
DEG_SPOP_SBC_1
Location:
172:176
E3 ligase:
SPOP
DEGRON score:
0.9427
ASA_SCORE:
72.78
COIL:
0.739
CONS_SCORE:
0.3825
DSS_SCORE:
0.1878
HELIX:
0.1552
FCONS_SCORE:
0.8493
RIG_SCORE:
0.7998
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E186K
TCGA-DK-A1A3
BLCA
TCGA
AVTTS
DEG_SPOP_SBC_1
0.0556
p.E170K
DO558
BLCA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7222
p.L171M
DO233764
GACA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.3056
p.L171M
DO229055
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.3056
p.I181V
DO22237
LGG
ICGC
AVTTS
DEG_SPOP_SBC_1
0.3056
p.S183F
DO44881
LIHC
ICGC
AVTTS
DEG_SPOP_SBC_1
0.5833
p.R169H
ACH-000088
Non-Cancerous
CCLE
AVTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with RALY mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D1E9
GTP-binding protein 10
DEG_SPOP_SBC_1
378:382
AVTTS
SPOP
0.8328
More...
O15042
U2 snRNP-associated SURP motif-containing protein
DEG_SPOP_SBC_1
773:777
AVTTS
SPOP
0.9929
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
2240:2244
AVTTS
SPOP
0.9879
More...
Q2NKQ1
Small G protein signaling modulator 1
DEG_SPOP_SBC_1
906:910
AVTTS
SPOP
0.9012
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
702:706
AVTTS
SPOP
0.7279
More...
Q8TEW8
Partitioning defective 3 homolog B
DEG_SPOP_SBC_1
616:620
AVTTS
SPOP
0.734
More...
Q9UKM9
RNA-binding protein Raly
DEG_SPOP_SBC_1
172:176
AVTTS
SPOP
0.9427
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
422:426
AVTTS
SPOP
0.8621
More...