DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTS
Uniprot ID:
Q9H0E3
Source protein:
Histone deacetylase complex subunit SAP130
Source gene:
SAP130
Class:
DEG_SPOP_SBC_1
Location:
422:426
E3 ligase:
SPOP
DEGRON score:
0.8621
ASA_SCORE:
89.5
COIL:
0.941
CONS_SCORE:
0.4819
DSS_SCORE:
0.4701
HELIX:
0.02
FCONS_SCORE:
1.062
RIG_SCORE:
0.7216
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R418W
DO48444
BLCA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.2222
p.R418W
ACH-000432
Leukemia
CCLE
AVTTS
DEG_SPOP_SBC_1
0.2222
p.R418W
BV-173
haematopoietic_and_lymphoid_tissue
COSMIC
AVTTS
DEG_SPOP_SBC_1
0.2222
p.E426K
DO10475
COAD
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7022
p.A425D
DO228948
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7793
p.A425D
DO228971
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7793
p.A425V
DO222494
MELA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.6936
p.D422N
ACH-000985
Colon/Colorectal Cancer
CCLE
AVTTS
DEG_SPOP_SBC_1
0.6932
p.D422N
LS-411N
large_intestine
COSMIC
AVTTS
DEG_SPOP_SBC_1
0.6932
Drug responses associated with SAP130 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D1E9
GTP-binding protein 10
DEG_SPOP_SBC_1
378:382
AVTTS
SPOP
0.8328
More...
O15042
U2 snRNP-associated SURP motif-containing protein
DEG_SPOP_SBC_1
773:777
AVTTS
SPOP
0.9929
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
2240:2244
AVTTS
SPOP
0.9879
More...
Q2NKQ1
Small G protein signaling modulator 1
DEG_SPOP_SBC_1
906:910
AVTTS
SPOP
0.9012
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
702:706
AVTTS
SPOP
0.7279
More...
Q8TEW8
Partitioning defective 3 homolog B
DEG_SPOP_SBC_1
616:620
AVTTS
SPOP
0.734
More...
Q9UKM9
RNA-binding protein Raly
DEG_SPOP_SBC_1
172:176
AVTTS
SPOP
0.9427
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
422:426
AVTTS
SPOP
0.8621
More...