DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AVTTS
Uniprot ID:
Q86TC9
Source protein:
Myopalladin
Source gene:
MYPN
Class:
DEG_SPOP_SBC_1
Location:
702:706
E3 ligase:
SPOP
DEGRON score:
0.7279
ASA_SCORE:
69.62
COIL:
0.6364
CONS_SCORE:
0.3111
DSS_SCORE:
0.5214
HELIX:
0.0458
FCONS_SCORE:
0.911
RIG_SCORE:
0.691
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P713S
TCGA-16-0849
GBM
TCGA
AVTTS
DEG_SPOP_SBC_1
0.1389
p.P700S
TCGA-A2-A0CL
BRCA
TCGA
AVTTS
DEG_SPOP_SBC_1
0.2778
p.P700S
SIDM00040
Gastric Carcinoma
GDSC
AVTTS
DEG_SPOP_SBC_1
0.2778
p.P700S
ACH-002202
Gastric Cancer
CCLE
AVTTS
DEG_SPOP_SBC_1
0.2778
p.P700S
TMK-1
stomach
COSMIC
AVTTS
DEG_SPOP_SBC_1
0.2778
p.A699D
TCGA-EI-6514
READ
TCGA
AVTTS
DEG_SPOP_SBC_1
0.25
p.K708N
DO229018
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.2778
p.Q709H
DO229022
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.25
p.W703L
DO229022
LICA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7015
p.F704Y
DO222363
MELA
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7528
p.G695V
DO37447
SKCM
ICGC
AVTTS
DEG_SPOP_SBC_1
0.1389
p.G695W
DO50279
SKCM
ICGC
AVTTS
DEG_SPOP_SBC_1
0.1389
p.D706Y
DO41020
UCEC
ICGC
AVTTS
DEG_SPOP_SBC_1
0.7325
p.R713I
DO41488
UCEC
ICGC
AVTTS
DEG_SPOP_SBC_1
0.1389
p.N698S
SIDM00234
Other Solid Cancers
GDSC
AVTTS
DEG_SPOP_SBC_1
0.2222
p.N698S
TC-YIK
cervix
COSMIC
AVTTS
DEG_SPOP_SBC_1
0.2222
p.K705E
LCLC-97TM1
lung
COSMIC
AVTTS
DEG_SPOP_SBC_1
0.7022
Drug responses associated with MYPN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A4D1E9
GTP-binding protein 10
DEG_SPOP_SBC_1
378:382
AVTTS
SPOP
0.8328
More...
O15042
U2 snRNP-associated SURP motif-containing protein
DEG_SPOP_SBC_1
773:777
AVTTS
SPOP
0.9929
More...
O75376
Nuclear receptor corepressor 1
DEG_SPOP_SBC_1
2240:2244
AVTTS
SPOP
0.9879
More...
Q2NKQ1
Small G protein signaling modulator 1
DEG_SPOP_SBC_1
906:910
AVTTS
SPOP
0.9012
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
702:706
AVTTS
SPOP
0.7279
More...
Q8TEW8
Partitioning defective 3 homolog B
DEG_SPOP_SBC_1
616:620
AVTTS
SPOP
0.734
More...
Q9UKM9
RNA-binding protein Raly
DEG_SPOP_SBC_1
172:176
AVTTS
SPOP
0.9427
More...
Q9H0E3
Histone deacetylase complex subunit SAP130
DEG_SPOP_SBC_1
422:426
AVTTS
SPOP
0.8621
More...