DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PLSTT
Uniprot ID:
O60347
Source protein:
TBC1 domain family member 12
Source gene:
TBC1D12
Class:
DEG_SPOP_SBC_1
Location:
391:395
E3 ligase:
SPOP
DEGRON score:
0.9367
ASA_SCORE:
77.8
COIL:
0.7018
CONS_SCORE:
0.3339
DSS_SCORE:
0.507
HELIX:
0.2202
FCONS_SCORE:
1.0363
RIG_SCORE:
0.751
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K385N
TCGA-AX-A2HD
UCEC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.2778
p.K385N
DO232761
PBCA
ICGC
PLSTT
DEG_SPOP_SBC_1
0.2778
p.K385N
DO42608
UCEC
ICGC
PLSTT
DEG_SPOP_SBC_1
0.2778
p.R384H
DO227979
COCA
ICGC
PLSTT
DEG_SPOP_SBC_1
0.1389
p.R384H
DO228037
EOPC
ICGC
PLSTT
DEG_SPOP_SBC_1
0.1389
Drug responses associated with TBC1D12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94910
Adhesion G protein-coupled receptor L1
DEG_SPOP_SBC_1
410:414
PLSTT
SPOP
0.9976
More...
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
299:303
PLSTT
SPOP
0.9511
More...
O95319
CUGBP Elav-like family member 2
DEG_SPOP_SBC_1
304:308
PLSTT
SPOP
0.7964
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2108:2112
PLSTT
SPOP
0.6286
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3464:3468
PLSTT
SPOP
0.5305
More...
Q969V6
Myocardin-related transcription factor A
DEG_SPOP_SBC_1
904:908
PLSTT
SPOP
0.931
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
443:447
PLSTT
SPOP
0.9874
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
1064:1068
PLSTT
SPOP
0.9334
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2228:2232
PLSTT
SPOP
0.9645
More...
O60347
TBC1 domain family member 12
DEG_SPOP_SBC_1
391:395
PLSTT
SPOP
0.9367
More...
Q9P1G2
Putative uncharacterized protein encoded by RBM12B-AS1
DEG_SPOP_SBC_1
24:28
PLSTT
SPOP
0.9186
More...