DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLSTT
Uniprot ID:
O94991
Source protein:
SLIT and NTRK-like protein 5
Source gene:
SLITRK5
Class:
DEG_SPOP_SBC_1
Location:
299:303
E3 ligase:
SPOP
DEGRON score:
0.9511
ASA_SCORE:
49.56
COIL:
0.78
CONS_SCORE:
0.6506
DSS_SCORE:
0.5258
HELIX:
0.1016
FCONS_SCORE:
1.0328
RIG_SCORE:
0.6899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E293K
TCGA-18-3409
LUSC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1667
p.E293K
TCGA-A6-5661
COAD
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1667
p.P310Q
TCGA-43-2576
LUSC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1389
p.T308N
TCGA-44-3918
LUAD
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1944
p.P310L
TCGA-D1-A167
UCEC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1389
p.P310L
SIDM01560
Rhabdomyosarcoma
GDSC
PLSTT
DEG_SPOP_SBC_1
0.1389
p.L306S
TCGA-EY-A214
UCEC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.25
p.T303M
TCGA-IG-A97I
ESCA
TCGA
PLSTT
DEG_SPOP_SBC_1
0.7423
p.T303M
TCGA-L5-A4OI
ESCA
TCGA
PLSTT
DEG_SPOP_SBC_1
0.7423
p.E293D
TCGA-N9-A4Q7
UCS
TCGA
PLSTT
DEG_SPOP_SBC_1
0.1667
p.H307Y
TCGA-VS-A8EC
CESC
TCGA
PLSTT
DEG_SPOP_SBC_1
0.2222
p.H307Y
SIDM00451
T-Lymphoblastic Leukemia
GDSC
PLSTT
DEG_SPOP_SBC_1
0.2222
p.H307Y
ACH-000937
Leukemia
CCLE
PLSTT
DEG_SPOP_SBC_1
0.2222
p.H307Y
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
PLSTT
DEG_SPOP_SBC_1
0.2222
p.L302V
DO8842
COAD
ICGC
PLSTT
DEG_SPOP_SBC_1
0.6765
p.L302V
DO46657
PAAD
ICGC
PLSTT
DEG_SPOP_SBC_1
0.6765
p.L302F
DO8546
COAD
ICGC
PLSTT
DEG_SPOP_SBC_1
0.6981
p.L302F
DO229031
LICA
ICGC
PLSTT
DEG_SPOP_SBC_1
0.6981
p.D309E
DO233178
GACA
ICGC
PLSTT
DEG_SPOP_SBC_1
0.1667
p.S301F
DO233762
GACA
ICGC
PLSTT
DEG_SPOP_SBC_1
0.7982
p.L290P
DO18016
KIRC
ICGC
PLSTT
DEG_SPOP_SBC_1
0.0833
p.R291M
DO23629
LUAD
ICGC
PLSTT
DEG_SPOP_SBC_1
0.1111
p.P299H
SIDM02016
Colorectal Carcinoma
GDSC
PLSTT
DEG_SPOP_SBC_1
0.7694
p.T308I
SIDM00453
Pancreatic Carcinoma
GDSC
PLSTT
DEG_SPOP_SBC_1
0.1944
p.T308I
ACH-000023
Pancreatic Cancer
CCLE
PLSTT
DEG_SPOP_SBC_1
0.1944
p.T308I
PA-TU-8988T
pancreas
COSMIC
PLSTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with SLITRK5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94910
Adhesion G protein-coupled receptor L1
DEG_SPOP_SBC_1
410:414
PLSTT
SPOP
0.9976
More...
O94991
SLIT and NTRK-like protein 5
DEG_SPOP_SBC_1
299:303
PLSTT
SPOP
0.9511
More...
O95319
CUGBP Elav-like family member 2
DEG_SPOP_SBC_1
304:308
PLSTT
SPOP
0.7964
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
2108:2112
PLSTT
SPOP
0.6286
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3464:3468
PLSTT
SPOP
0.5305
More...
Q969V6
Myocardin-related transcription factor A
DEG_SPOP_SBC_1
904:908
PLSTT
SPOP
0.931
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
443:447
PLSTT
SPOP
0.9874
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
1064:1068
PLSTT
SPOP
0.9334
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
2228:2232
PLSTT
SPOP
0.9645
More...
O60347
TBC1 domain family member 12
DEG_SPOP_SBC_1
391:395
PLSTT
SPOP
0.9367
More...
Q9P1G2
Putative uncharacterized protein encoded by RBM12B-AS1
DEG_SPOP_SBC_1
24:28
PLSTT
SPOP
0.9186
More...