DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PNSST
Uniprot ID:
P78536
Source protein:
Disintegrin and metalloproteinase domain-containing protein 17
Source gene:
ADAM17
Class:
DEG_SPOP_SBC_1
Location:
783:787
E3 ligase:
SPOP
DEGRON score:
0.9977
ASA_SCORE:
78.34
COIL:
0.8868
CONS_SCORE:
0.296
DSS_SCORE:
0.616
HELIX:
0.0886
FCONS_SCORE:
0.9948
RIG_SCORE:
0.6123
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A789P
TCGA-30-1857
OV
TCGA
PNSST
DEG_SPOP_SBC_1
0.2778
p.A789P
DO28491
OV
ICGC
PNSST
DEG_SPOP_SBC_1
0.2778
p.E778Q
TCGA-97-A4M3
LUAD
TCGA
PNSST
DEG_SPOP_SBC_1
0.1944
p.E778Q
TCGA-ZF-A9RD
BLCA
TCGA
PNSST
DEG_SPOP_SBC_1
0.1944
p.E778Q
DO219070
BLCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.1944
p.E778Q
DO218937
LUAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.1944
p.F792L
TCGA-97-A4M7
LUAD
TCGA
PNSST
DEG_SPOP_SBC_1
0.1944
p.F792L
DO45386
LUAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.1944
p.T796M
TCGA-DD-A3A7
LIHC
TCGA
PNSST
DEG_SPOP_SBC_1
0.5278
p.T796M
DO44982
LIHC
ICGC
PNSST
DEG_SPOP_SBC_1
0.5278
p.T796M
SIDM00180
Kidney Carcinoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.5278
p.T796M
SIDM01645
Non-Cancerous
GDSC
PNSST
DEG_SPOP_SBC_1
0.5278
Drug responses associated with ADAM17 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78536
Disintegrin and metalloproteinase domain-containing protein 17
DEG_SPOP_SBC_1
783:787
PNSST
SPOP
0.9977
More...
Q05397
Focal adhesion kinase 1
DEG_SPOP_SBC_1
14:18
PNSST
SPOP
0.8344
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
594:598
PNSST
SPOP
0.9968
More...
Q659C4
La-related protein 1B
DEG_SPOP_SBC_1
876:880
PNSST
SPOP
0.9535
More...
Q8NFP9
Neurobeachin
DEG_SPOP_SBC_1
1140:1144
PNSST
SPOP
0.9729
More...
Q8WV28
B-cell linker protein
DEG_SPOP_SBC_1
212:216
PNSST
SPOP
0.9611
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
294:298
PNSST
SPOP
0.9767
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
678:682
PNSST
SPOP
0.7312
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
531:535
PNSST
SPOP
0.9864
More...