DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PNSST
Uniprot ID:
Q05397
Source protein:
Focal adhesion kinase 1
Source gene:
PTK2
Class:
DEG_SPOP_SBC_1
Location:
14:18
E3 ligase:
SPOP
DEGRON score:
0.8344
ASA_SCORE:
72.02
COIL:
0.9116
CONS_SCORE:
0.267
DSS_SCORE:
0.6348
HELIX:
0.0564
FCONS_SCORE:
0.8727
RIG_SCORE:
0.6106
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L6V
TCGA-29-1698
OV
TCGA
PNSST
DEG_SPOP_SBC_1
0.5556
p.L6V
DO28531
OV
ICGC
PNSST
DEG_SPOP_SBC_1
0.5556
p.R28C
TCGA-A5-A0G2
UCEC
TCGA
PNSST
DEG_SPOP_SBC_1
0.0556
p.R28C
DO41235
UCEC
ICGC
PNSST
DEG_SPOP_SBC_1
0.0556
p.S16L
TCGA-AP-A1E0
UCEC
TCGA
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
TCGA-D1-A16X
UCEC
TCGA
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
TCGA-E6-A1LX
UCEC
TCGA
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
DO8730
COAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
DO41020
UCEC
ICGC
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
DO43154
UCEC
ICGC
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
DO41799
UCEC
ICGC
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
SIDM01043
Other Sarcomas
GDSC
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
ACH-000913
Endometrial/Uterine Cancer
CCLE
PNSST
DEG_SPOP_SBC_1
0.8778
p.S16L
ESS-1
endometrium
COSMIC
PNSST
DEG_SPOP_SBC_1
0.8778
p.P14T
TCGA-IS-A3KA
SARC
TCGA
PNSST
DEG_SPOP_SBC_1
0.7031
p.P14T
DO220172
SARC
ICGC
PNSST
DEG_SPOP_SBC_1
0.7031
p.S15F
DO51925
BLCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.7982
p.I14K
DO227987
COCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.7531
p.P25S
DO50357
ESAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.1389
p.D7G
DO233089
GACA
ICGC
PNSST
DEG_SPOP_SBC_1
0.1389
p.R28S
DO229041
LICA
ICGC
PNSST
DEG_SPOP_SBC_1
0.0556
p.E9D
DO229044
LICA
ICGC
PNSST
DEG_SPOP_SBC_1
0.6389
p.S15Y
DO46657
PAAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.712
p.S17Y
DO41133
UCEC
ICGC
PNSST
DEG_SPOP_SBC_1
0.712
p.P8S
SIDM01629
Melanoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.2778
p.P8S
ACH-000404
Skin Cancer
CCLE
PNSST
DEG_SPOP_SBC_1
0.2778
p.N15S
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PNSST
DEG_SPOP_SBC_1
0.5958
Drug responses associated with PTK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00210
UNCLASSIFIED|ovary
p.S677G (No)
GDSC
PF-562271
3.2891
SIDM00087
MM|myeloma
p.P731S (No)
GDSC
PF-562271
12.713
SIDM01073
UNCLASSIFIED|hairy_cell_leukaemia
p.W613* (No)
GDSC
PF-562271
5.748
SIDM00381
CESC|cervix
p.L1046P (No)
GDSC
PF-562271
11.5217
SIDM01090
COREAD|large_intestine
p.P410H (No)
GDSC
PF-562271
2.6324
SIDM00995
UNCLASSIFIED|skin_other
p.S745fs*36 (No)
GDSC
PF-562271
1.6673
SIDM00995
UNCLASSIFIED|skin_other
p.M33fs*5 (No)
GDSC
PF-562271
1.6673
SIDM00516
SKCM|melanoma
p.E809K (No)
GDSC
PF-562271
8.1771
SIDM01043
UNCLASSIFIED|endometrium
p.S16L (Yes)
GDSC
PF-562271
4.0506
SIDM00518
MESO|mesothelioma
p.A533S (No)
GDSC
PF-562271
5.77
SIDM00716
LUSC|lung_NSCLC_squamous_cell_carcinoma
p.E544K (No)
GDSC
PF-562271
7.4519
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.S517C (No)
GDSC
PF-562271
43.9575
SIDM00889
CESC|cervix
p.S307I (No)
GDSC
PF-562271
2.3525
SIDM00596
UCEC|endometrium
p.S887N (No)
GDSC
PF-562271
7.126
SIDM00150
COREAD|large_intestine
p.P116S (No)
GDSC
PF-562271
0.4899
SIDM00660
COREAD|large_intestine
p.R811H (No)
GDSC
PF-562271
4.0457
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.N46S (No)
GDSC
PF-562271
8.6162
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.N15S (Yes)
GDSC
PF-562271
8.6162
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.I21R (Yes)
GDSC
PF-562271
8.6162
SIDM00143
SCLC|lung_small_cell_carcinoma
p.I1038V (No)
GDSC
PF-562271
17.7554
SIDM00789
COREAD|large_intestine
p.P2H (No)
GDSC
PF-562271
37.2504
SIDM00534
COREAD|large_intestine
p.R597* (No)
GDSC
PF-562271
7.9391
SIDM01175
UNCLASSIFIED|fibrosarcoma
p.C459G (No)
GDSC
PF-562271
5.5512
SIDM00414
BLCA|bladder
p.C74W (No)
GDSC
PF-562271
3.2423
SIDM00480
OV|ovary
p.R841Q (No)
GDSC
PF-562271
19.8104
SIDM00545
SKCM|melanoma
p.P70S (No)
GDSC
PF-562271
60.8052
SIDM00448
DLBC|B_cell_lymphoma
p.A551T (No)
GDSC
PF-562271
14.3947
SIDM00528
BRCA|breast
p.F669L (No)
GDSC
PF-562271
10.9497
SIDM00927
SCLC|lung_small_cell_carcinoma
p.P733T (No)
GDSC
PF-562271
3.2754
SIDM00133
LUAD|lung_NSCLC_adenocarcinoma
p.S522C (No)
GDSC
PF-562271
2.7144
SIDM01040
OV|ovary
p.T979S (No)
GDSC
PF-562271
10.1862
SIDM00556
NB|neuroblastoma
p.L1046P (No)
GDSC
PF-562271
20.8426
SIDM00118
COREAD|large_intestine
p.Y548D (No)
GDSC
PF-562271
3.5879
All proteins holding degron of PNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78536
Disintegrin and metalloproteinase domain-containing protein 17
DEG_SPOP_SBC_1
783:787
PNSST
SPOP
0.9977
More...
Q05397
Focal adhesion kinase 1
DEG_SPOP_SBC_1
14:18
PNSST
SPOP
0.8344
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
594:598
PNSST
SPOP
0.9968
More...
Q659C4
La-related protein 1B
DEG_SPOP_SBC_1
876:880
PNSST
SPOP
0.9535
More...
Q8NFP9
Neurobeachin
DEG_SPOP_SBC_1
1140:1144
PNSST
SPOP
0.9729
More...
Q8WV28
B-cell linker protein
DEG_SPOP_SBC_1
212:216
PNSST
SPOP
0.9611
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
294:298
PNSST
SPOP
0.9767
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
678:682
PNSST
SPOP
0.7312
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
531:535
PNSST
SPOP
0.9864
More...