DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
PNSST
Uniprot ID:
Q659C4
Source protein:
La-related protein 1B
Source gene:
LARP1B
Class:
DEG_SPOP_SBC_1
Location:
876:880
E3 ligase:
SPOP
DEGRON score:
0.9535
ASA_SCORE:
100.44
COIL:
0.9544
CONS_SCORE:
0.2784
DSS_SCORE:
0.8345
HELIX:
0.0332
FCONS_SCORE:
0.9789
RIG_SCORE:
0.4929
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R871H
SIDM00773
Non-Cancerous
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM01112
Osteosarcoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM00879
Breast Carcinoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM00032
Bladder Carcinoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM01503
Small Cell Lung Carcinoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM01689
B-Lymphoblastic Leukemia
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.R871H
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.T880K
ACH-001611
Brain Cancer
CCLE
PNSST
DEG_SPOP_SBC_1
0.7306
Drug responses associated with LARP1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78536
Disintegrin and metalloproteinase domain-containing protein 17
DEG_SPOP_SBC_1
783:787
PNSST
SPOP
0.9977
More...
Q05397
Focal adhesion kinase 1
DEG_SPOP_SBC_1
14:18
PNSST
SPOP
0.8344
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
594:598
PNSST
SPOP
0.9968
More...
Q659C4
La-related protein 1B
DEG_SPOP_SBC_1
876:880
PNSST
SPOP
0.9535
More...
Q8NFP9
Neurobeachin
DEG_SPOP_SBC_1
1140:1144
PNSST
SPOP
0.9729
More...
Q8WV28
B-cell linker protein
DEG_SPOP_SBC_1
212:216
PNSST
SPOP
0.9611
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
294:298
PNSST
SPOP
0.9767
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
678:682
PNSST
SPOP
0.7312
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
531:535
PNSST
SPOP
0.9864
More...