DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PNSST
Uniprot ID:
Q9ULT6
Source protein:
E3 ubiquitin-protein ligase ZNRF3
Source gene:
ZNRF3
Class:
DEG_SPOP_SBC_1
Location:
678:682
E3 ligase:
SPOP
DEGRON score:
0.7312
ASA_SCORE:
82.48
COIL:
0.8618
CONS_SCORE:
0.3146
DSS_SCORE:
0.6467
HELIX:
0.0754
FCONS_SCORE:
0.7624
RIG_SCORE:
0.553
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S683L
TCGA-22-5491
LUSC
TCGA
PNSST
DEG_SPOP_SBC_1
0.3056
p.S683L
TCGA-DK-AA75
BLCA
TCGA
PNSST
DEG_SPOP_SBC_1
0.3056
p.P678H
TCGA-D3-A1Q3
SKCM
TCGA
PNSST
DEG_SPOP_SBC_1
0.7694
p.L687F
TCGA-FW-A3R5
SKCM
TCGA
PNSST
DEG_SPOP_SBC_1
0.1944
p.S671F
TCGA-W3-AA1V
SKCM
TCGA
PNSST
DEG_SPOP_SBC_1
0.1389
p.P678S
DO5521
BRCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.6752
p.G692R
DO230343
COCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.0556
p.R689H
DO228041
EOPC
ICGC
PNSST
DEG_SPOP_SBC_1
0.1389
p.K673R
DO233109
GACA
ICGC
PNSST
DEG_SPOP_SBC_1
0.1944
p.V687M
DO229453
SKCA
ICGC
PNSST
DEG_SPOP_SBC_1
0.1944
p.E683A
DO222328
STAD
ICGC
PNSST
DEG_SPOP_SBC_1
0.3056
p.L687R
SIDM00567
Other Solid Cancers
GDSC
PNSST
DEG_SPOP_SBC_1
0.1944
p.L687R
ACH-000776
Brain Cancer
CCLE
PNSST
DEG_SPOP_SBC_1
0.1944
p.L687R
ONS-76
central_nervous_system
COSMIC
PNSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with ZNRF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78536
Disintegrin and metalloproteinase domain-containing protein 17
DEG_SPOP_SBC_1
783:787
PNSST
SPOP
0.9977
More...
Q05397
Focal adhesion kinase 1
DEG_SPOP_SBC_1
14:18
PNSST
SPOP
0.8344
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
594:598
PNSST
SPOP
0.9968
More...
Q659C4
La-related protein 1B
DEG_SPOP_SBC_1
876:880
PNSST
SPOP
0.9535
More...
Q8NFP9
Neurobeachin
DEG_SPOP_SBC_1
1140:1144
PNSST
SPOP
0.9729
More...
Q8WV28
B-cell linker protein
DEG_SPOP_SBC_1
212:216
PNSST
SPOP
0.9611
More...
Q92547
DNA topoisomerase 2-binding protein 1
DEG_SPOP_SBC_1
294:298
PNSST
SPOP
0.9767
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
678:682
PNSST
SPOP
0.7312
More...
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_SPOP_SBC_1
531:535
PNSST
SPOP
0.9864
More...