DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQTST
Uniprot ID:
P30260
Source protein:
Cell division cycle protein 27 homolog
Source gene:
CDC27
Class:
DEG_SPOP_SBC_1
Location:
354:358
E3 ligase:
SPOP
DEGRON score:
0.986
ASA_SCORE:
93.12
COIL:
0.9366
CONS_SCORE:
0.2819
DSS_SCORE:
0.7046
HELIX:
0.029
FCONS_SCORE:
1.1209
RIG_SCORE:
0.5736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L352I
TCGA-06-5416
GBM
TCGA
PQTST
DEG_SPOP_SBC_1
0.2778
p.T362A
TCGA-AP-A059
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.2222
p.V368I
TCGA-B5-A11E
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.5
p.P366H
TCGA-EB-A24C
SKCM
TCGA
PQTST
DEG_SPOP_SBC_1
0.5556
p.Q367H
TCGA-G7-6797
KIRP
TCGA
PQTST
DEG_SPOP_SBC_1
0.0833
p.L352F
TCGA-MT-A67F
HNSC
TCGA
PQTST
DEG_SPOP_SBC_1
0.2778
p.Q367E
TCGA-PG-A914
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.0833
p.I345V
DO221656
ALL
ICGC
PQTST
DEG_SPOP_SBC_1
0.0833
p.I345V
DO229052
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.0833
p.I345V
DO229062
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.0833
p.L346I
DO10880
GBM
ICGC
PQTST
DEG_SPOP_SBC_1
0.1111
p.L346I
DO229035
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.1111
p.L346F
DO49070
HNSC
ICGC
PQTST
DEG_SPOP_SBC_1
0.1111
p.Q361H
DO20917
KIRP
ICGC
PQTST
DEG_SPOP_SBC_1
0.25
p.Q348K
DO228950
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.1667
p.I367M
DO229051
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.0833
p.T356I
DO50771
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.7078
p.T368I
DO229494
SKCA
ICGC
PQTST
DEG_SPOP_SBC_1
0.5
p.P360H
DO37438
SKCM
ICGC
PQTST
DEG_SPOP_SBC_1
0.2778
p.V362I
DO41644
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.2222
p.Q361E
DO52421
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.25
p.T356A
DO41361
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.7139
p.T365I
SIDM00845
Burkitt's Lymphoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.1389
p.T365I
ACH-000786
Lymphoma
CCLE
PQTST
DEG_SPOP_SBC_1
0.1389
p.T365I
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQTST
DEG_SPOP_SBC_1
0.1389
p.P366R
ACH-000647
Esophageal Cancer
CCLE
PQTST
DEG_SPOP_SBC_1
0.5556
p.T359I
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQTST
DEG_SPOP_SBC_1
0.75
p.T368A
NCI-H2110
lung
COSMIC
PQTST
DEG_SPOP_SBC_1
0.5
Drug responses associated with CDC27 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30260
Cell division cycle protein 27 homolog
DEG_SPOP_SBC_1
354:358
PQTST
SPOP
0.986
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2264:2268
PQTST
SPOP
0.5315
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2816:2820
PQTST
SPOP
0.8656
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3803:3807
PQTST
SPOP
0.8196
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3819:3823
PQTST
SPOP
0.7188
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
1556:1560
PQTST
SPOP
0.915
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10452:10456
PQTST
SPOP
0.5496
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11695:11699
PQTST
SPOP
0.8041
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
546:550
PQTST
SPOP
0.5136
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
162:166
PQTST
SPOP
0.818
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
983:987
PQTST
SPOP
0.9317
More...
Q9HCS5
Band 4.1-like protein 4A
DEG_SPOP_SBC_1
658:662
PQTST
SPOP
0.9935
More...