DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
PQTST
Uniprot ID:
Q9HCS5
Source protein:
Band 4.1-like protein 4A
Source gene:
EPB41L4A
Class:
DEG_SPOP_SBC_1
Location:
658:662
E3 ligase:
SPOP
DEGRON score:
0.9935
ASA_SCORE:
86.06
COIL:
0.9114
CONS_SCORE:
0.4083
DSS_SCORE:
0.7077
HELIX:
0.0566
FCONS_SCORE:
1.0505
RIG_SCORE:
0.6551
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S661P
TCGA-A6-3808
COAD
TCGA
PQTST
DEG_SPOP_SBC_1
0.6752
p.S661P
DO8408
COAD
ICGC
PQTST
DEG_SPOP_SBC_1
0.6752
p.L665M
TCGA-B5-A11E
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.25
p.L665M
DO233869
GACA
ICGC
PQTST
DEG_SPOP_SBC_1
0.25
p.L665M
DO41644
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.25
p.Q659E
TCGA-BH-A0W7
BRCA
TCGA
PQTST
DEG_SPOP_SBC_1
0.5633
p.Q659E
TCGA-T3-A92M
HNSC
TCGA
PQTST
DEG_SPOP_SBC_1
0.5633
p.Q659E
DO1272
BRCA
ICGC
PQTST
DEG_SPOP_SBC_1
0.5633
p.Q659E
DO223269
HNSC
ICGC
PQTST
DEG_SPOP_SBC_1
0.5633
p.G648R
TCGA-D3-A8GI
SKCM
TCGA
PQTST
DEG_SPOP_SBC_1
0.0556
p.G648R
DO50284
SKCM
ICGC
PQTST
DEG_SPOP_SBC_1
0.0556
p.A671E
DO218890
SKCA
ICGC
PQTST
DEG_SPOP_SBC_1
0.0833
p.A666V
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.2222
p.K657E
SIDM00580
Acute Myeloid Leukemia
GDSC
PQTST
DEG_SPOP_SBC_1
0.3056
p.K657E
ACH-000168
Leukemia
CCLE
PQTST
DEG_SPOP_SBC_1
0.3056
p.K657E
NOMO-1
haematopoietic_and_lymphoid_tissue
COSMIC
PQTST
DEG_SPOP_SBC_1
0.3056
p.S652R
SIDM00943
Pancreatic Carcinoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.6111
Drug responses associated with EPB41L4A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30260
Cell division cycle protein 27 homolog
DEG_SPOP_SBC_1
354:358
PQTST
SPOP
0.986
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2264:2268
PQTST
SPOP
0.5315
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2816:2820
PQTST
SPOP
0.8656
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3803:3807
PQTST
SPOP
0.8196
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3819:3823
PQTST
SPOP
0.7188
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
1556:1560
PQTST
SPOP
0.915
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10452:10456
PQTST
SPOP
0.5496
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11695:11699
PQTST
SPOP
0.8041
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
546:550
PQTST
SPOP
0.5136
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
162:166
PQTST
SPOP
0.818
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
983:987
PQTST
SPOP
0.9317
More...
Q9HCS5
Band 4.1-like protein 4A
DEG_SPOP_SBC_1
658:662
PQTST
SPOP
0.9935
More...