DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PQTST
Uniprot ID:
Q9HCJ0
Source protein:
Trinucleotide repeat-containing gene 6C protein
Source gene:
TNRC6C
Class:
DEG_SPOP_SBC_1
Location:
162:166
E3 ligase:
SPOP
DEGRON score:
0.818
ASA_SCORE:
93.68
COIL:
0.9182
CONS_SCORE:
0.3037
DSS_SCORE:
0.7371
HELIX:
0.0638
FCONS_SCORE:
0.8866
RIG_SCORE:
0.6318
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P162L
TCGA-A5-A0G2
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.7582
p.P162L
DO41235
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.7582
p.T164M
TCGA-A8-A07W
BRCA
TCGA
PQTST
DEG_SPOP_SBC_1
0.7423
p.T164M
DO1297
BRCA
ICGC
PQTST
DEG_SPOP_SBC_1
0.7423
p.E162K
NCI-H441
lung
COSMIC
PQTST
DEG_SPOP_SBC_1
0.7022
p.S167Y
TCGA-AA-3984
COAD
TCGA
PQTST
DEG_SPOP_SBC_1
0.3056
p.S167Y
DO9002
COAD
ICGC
PQTST
DEG_SPOP_SBC_1
0.3056
p.E158K
TCGA-FU-A23L
CESC
TCGA
PQTST
DEG_SPOP_SBC_1
0.2222
p.E158K
DO6278
CESC
ICGC
PQTST
DEG_SPOP_SBC_1
0.2222
p.V170L
DO228976
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.2222
p.S171Y
TCGA-AG-A002
READ
TCGA
PQTST
DEG_SPOP_SBC_1
0.1944
p.A174S
DO229026
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00845
Burkitt's Lymphoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00461
Acute Myeloid Leukemia
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM01519
Head and Neck Carcinoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
ACH-000786
Lymphoma
CCLE
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
ACH-000992
Head and Neck Cancer
CCLE
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQTST
DEG_SPOP_SBC_1
0.1111
p.P176L
ACH-001378
Pancreatic Cancer
CCLE
PQTST
DEG_SPOP_SBC_1
0.0556
Showing 1 to 20 of 20 entries
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Drug responses associated with TNRC6C mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PQTST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCS5
Band 4.1-like protein 4A
DEG_SPOP_SBC_1
658:662
PQTST
SPOP
0.9935
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
983:987
PQTST
SPOP
0.9317
More...
P30260
Cell division cycle protein 27 homolog
DEG_SPOP_SBC_1
354:358
PQTST
SPOP
0.986
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
546:550
PQTST
SPOP
0.5136
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10452:10456
PQTST
SPOP
0.5496
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11695:11699
PQTST
SPOP
0.8041
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2264:2268
PQTST
SPOP
0.5315
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2816:2820
PQTST
SPOP
0.8656
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3803:3807
PQTST
SPOP
0.8196
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3819:3823
PQTST
SPOP
0.7188
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
1556:1560
PQTST
SPOP
0.915
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
162:166
PQTST
SPOP
0.818
More...
Showing 1 to 12 of 12 entries
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