DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQTST
Uniprot ID:
Q9HCJ0
Source protein:
Trinucleotide repeat-containing gene 6C protein
Source gene:
TNRC6C
Class:
DEG_SPOP_SBC_1
Location:
162:166
E3 ligase:
SPOP
DEGRON score:
0.818
ASA_SCORE:
93.68
COIL:
0.9182
CONS_SCORE:
0.3037
DSS_SCORE:
0.7371
HELIX:
0.0638
FCONS_SCORE:
0.8866
RIG_SCORE:
0.6318
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P162L
TCGA-A5-A0G2
UCEC
TCGA
PQTST
DEG_SPOP_SBC_1
0.7582
p.P162L
DO41235
UCEC
ICGC
PQTST
DEG_SPOP_SBC_1
0.7582
p.T164M
TCGA-A8-A07W
BRCA
TCGA
PQTST
DEG_SPOP_SBC_1
0.7423
p.T164M
DO1297
BRCA
ICGC
PQTST
DEG_SPOP_SBC_1
0.7423
p.S167Y
TCGA-AA-3984
COAD
TCGA
PQTST
DEG_SPOP_SBC_1
0.3056
p.S167Y
DO9002
COAD
ICGC
PQTST
DEG_SPOP_SBC_1
0.3056
p.S171Y
TCGA-AG-A002
READ
TCGA
PQTST
DEG_SPOP_SBC_1
0.1944
p.E158K
TCGA-FU-A23L
CESC
TCGA
PQTST
DEG_SPOP_SBC_1
0.2222
p.E158K
DO6278
CESC
ICGC
PQTST
DEG_SPOP_SBC_1
0.2222
p.V170L
DO228976
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.2222
p.A174S
DO229026
LICA
ICGC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00845
Burkitt's Lymphoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00461
Acute Myeloid Leukemia
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
SIDM01519
Head and Neck Carcinoma
GDSC
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
ACH-000786
Lymphoma
CCLE
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
ACH-000992
Head and Neck Cancer
CCLE
PQTST
DEG_SPOP_SBC_1
0.1111
p.A174V
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PQTST
DEG_SPOP_SBC_1
0.1111
p.P176L
ACH-001378
Pancreatic Cancer
CCLE
PQTST
DEG_SPOP_SBC_1
0.0556
p.E162K
NCI-H441
lung
COSMIC
PQTST
DEG_SPOP_SBC_1
0.7022
Drug responses associated with TNRC6C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30260
Cell division cycle protein 27 homolog
DEG_SPOP_SBC_1
354:358
PQTST
SPOP
0.986
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2264:2268
PQTST
SPOP
0.5315
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2816:2820
PQTST
SPOP
0.8656
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3803:3807
PQTST
SPOP
0.8196
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3819:3823
PQTST
SPOP
0.7188
More...
Q14160
Protein scribble homolog
DEG_SPOP_SBC_1
1556:1560
PQTST
SPOP
0.915
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
10452:10456
PQTST
SPOP
0.5496
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
11695:11699
PQTST
SPOP
0.8041
More...
Q9BY84
Dual specificity protein phosphatase 16
DEG_SPOP_SBC_1
546:550
PQTST
SPOP
0.5136
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
162:166
PQTST
SPOP
0.818
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
983:987
PQTST
SPOP
0.9317
More...
Q9HCS5
Band 4.1-like protein 4A
DEG_SPOP_SBC_1
658:662
PQTST
SPOP
0.9935
More...