DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VPTST
Uniprot ID:
P51843
Source protein:
Nuclear receptor subfamily 0 group B member 1
Source gene:
NR0B1
Class:
DEG_SPOP_SBC_1
Location:
216:220
E3 ligase:
SPOP
DEGRON score:
0.6965
ASA_SCORE:
69.28
COIL:
0.8328
CONS_SCORE:
0.3272
DSS_SCORE:
0.422
HELIX:
0.057
FCONS_SCORE:
0.9992
RIG_SCORE:
0.7827
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H206Q
TCGA-AC-A4ZE
BRCA
TCGA
VPTST
DEG_SPOP_SBC_1
0.0556
p.H206Q
DO223930
BRCA
ICGC
VPTST
DEG_SPOP_SBC_1
0.0556
p.P207L
TCGA-CM-6675
COAD
TCGA
VPTST
DEG_SPOP_SBC_1
0.0833
p.P207L
DO10349
COAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.0833
p.T218M
TCGA-D5-6533
COAD
TCGA
VPTST
DEG_SPOP_SBC_1
0.7423
p.T218M
DO8280
COAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.7423
p.T218M
DO42673
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.7423
p.T218M
SIDM00958
Chronic Myelogenous Leukemia
GDSC
VPTST
DEG_SPOP_SBC_1
0.7423
p.R230Q
TCGA-D5-6541
COAD
TCGA
VPTST
DEG_SPOP_SBC_1
0.0556
p.R230Q
DO10389
COAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.0556
p.A226T
TCGA-EO-A22R
UCEC
TCGA
VPTST
DEG_SPOP_SBC_1
0.1667
p.A226T
DO42713
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1667
p.R230W
TCGA-FU-A3TQ
CESC
TCGA
VPTST
DEG_SPOP_SBC_1
0.0556
p.R230W
DO44295
CESC
ICGC
VPTST
DEG_SPOP_SBC_1
0.0556
p.R230W
DO47911
STAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.0556
p.Q208R
DO228096
EOPC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1111
p.Q208R
DO229232
THCA
ICGC
VPTST
DEG_SPOP_SBC_1
0.1111
p.R230P
DO25444
LUAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.0556
p.A225V
SIDM00216
Colorectal Carcinoma
GDSC
VPTST
DEG_SPOP_SBC_1
0.1944
p.A225V
ACH-000989
Colon/Colorectal Cancer
CCLE
VPTST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with NR0B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29401
Transketolase
DEG_SPOP_SBC_1
440:444
VPTST
SPOP
0.7263
More...
P51843
Nuclear receptor subfamily 0 group B member 1
DEG_SPOP_SBC_1
216:220
VPTST
SPOP
0.6965
More...
P55199
RNA polymerase II elongation factor ELL
DEG_SPOP_SBC_1
499:503
VPTST
SPOP
0.8985
More...
Q01668
Voltage-dependent L-type calcium channel subunit alpha-1D
DEG_SPOP_SBC_1
1750:1754
VPTST
SPOP
0.9683
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
519:523
VPTST
SPOP
0.6443
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2415:2419
VPTST
SPOP
0.8829
More...
Q9H0M0
NEDD4-like E3 ubiquitin-protein ligase WWP1
DEG_SPOP_SBC_1
193:197
VPTST
SPOP
0.9832
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1433:1437
VPTST
SPOP
0.9542
More...