DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VPTST
Uniprot ID:
Q9H0M0
Source protein:
NEDD4-like E3 ubiquitin-protein ligase WWP1
Source gene:
WWP1
Class:
DEG_SPOP_SBC_1
Location:
193:197
E3 ligase:
SPOP
DEGRON score:
0.9832
ASA_SCORE:
76.82
COIL:
0.8984
CONS_SCORE:
0.4298
DSS_SCORE:
0.408
HELIX:
0.0462
FCONS_SCORE:
0.992
RIG_SCORE:
0.776
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y206H
TCGA-21-1080
LUSC
TCGA
VPTST
DEG_SPOP_SBC_1
0.0833
p.Y206H
DO26502
LUSC
ICGC
VPTST
DEG_SPOP_SBC_1
0.0833
p.Y206N
TCGA-69-7979
LUAD
TCGA
VPTST
DEG_SPOP_SBC_1
0.0833
p.Y206N
DO23874
LUAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.0833
p.G188V
TCGA-85-8354
LUSC
TCGA
VPTST
DEG_SPOP_SBC_1
0.1944
p.G188V
DO45467
LUSC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1944
p.V193A
TCGA-B5-A11E
UCEC
TCGA
VPTST
DEG_SPOP_SBC_1
0.5825
p.V193A
DO41644
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.5825
p.C204Y
TCGA-D1-A101
UCEC
TCGA
VPTST
DEG_SPOP_SBC_1
0.1389
p.C204Y
DO43955
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1389
p.N191T
TCGA-EO-A22R
UCEC
TCGA
VPTST
DEG_SPOP_SBC_1
0.2778
p.N191T
DO42713
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.2778
p.V193L
DO228976
LICA
ICGC
VPTST
DEG_SPOP_SBC_1
0.6765
p.E195D
DO23248
LINC
ICGC
VPTST
DEG_SPOP_SBC_1
0.6758
p.A197T
DO47769
STAD
ICGC
VPTST
DEG_SPOP_SBC_1
0.7139
p.D203G
DO42504
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1667
p.P202T
DO42673
UCEC
ICGC
VPTST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with WWP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29401
Transketolase
DEG_SPOP_SBC_1
440:444
VPTST
SPOP
0.7263
More...
P51843
Nuclear receptor subfamily 0 group B member 1
DEG_SPOP_SBC_1
216:220
VPTST
SPOP
0.6965
More...
P55199
RNA polymerase II elongation factor ELL
DEG_SPOP_SBC_1
499:503
VPTST
SPOP
0.8985
More...
Q01668
Voltage-dependent L-type calcium channel subunit alpha-1D
DEG_SPOP_SBC_1
1750:1754
VPTST
SPOP
0.9683
More...
Q6ZS17
Rho family-interacting cell polarization regulator 1
DEG_SPOP_SBC_1
519:523
VPTST
SPOP
0.6443
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
2415:2419
VPTST
SPOP
0.8829
More...
Q9H0M0
NEDD4-like E3 ubiquitin-protein ligase WWP1
DEG_SPOP_SBC_1
193:197
VPTST
SPOP
0.9832
More...
Q9H4A3
Serine/threonine-protein kinase WNK1
DEG_SPOP_SBC_1
1433:1437
VPTST
SPOP
0.9542
More...