DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVTSS
Uniprot ID:
P48431
Source protein:
Transcription factor SOX-2
Source gene:
SOX2
Class:
DEG_SPOP_SBC_1
Location:
254:258
E3 ligase:
SPOP
DEGRON score:
0.9969
ASA_SCORE:
87.36
COIL:
0.9166
CONS_SCORE:
0.4105
DSS_SCORE:
0.6086
HELIX:
0.0404
FCONS_SCORE:
0.994
RIG_SCORE:
0.6232
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q266E
TCGA-C5-A7UC
CESC
TCGA
VVTSS
DEG_SPOP_SBC_1
0.1111
p.Q266E
DO49889
CESC
ICGC
VVTSS
DEG_SPOP_SBC_1
0.1111
p.G268A
TCGA-CJ-4901
KIRC
TCGA
VVTSS
DEG_SPOP_SBC_1
0.0556
p.G268A
DO16276
KIRC
ICGC
VVTSS
DEG_SPOP_SBC_1
0.0556
p.S261F
TCGA-IB-7651
PAAD
TCGA
VVTSS
DEG_SPOP_SBC_1
0.25
p.S261F
DO46657
PAAD
ICGC
VVTSS
DEG_SPOP_SBC_1
0.25
p.P264H
DO224904
BRCA
ICGC
VVTSS
DEG_SPOP_SBC_1
0.1667
p.G268E
SIDM00989
Bladder Carcinoma
GDSC
VVTSS
DEG_SPOP_SBC_1
0.0556
p.G268E
ACH-000802
Bladder Cancer
CCLE
VVTSS
DEG_SPOP_SBC_1
0.0556
p.G268E
BFTC-905
urinary_tract
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.0556
p.S257F
ACH-000923
Lymphoma
CCLE
VVTSS
DEG_SPOP_SBC_1
0.7982
p.V254L
ACH-002273
Leukemia
CCLE
VVTSS
DEG_SPOP_SBC_1
0.6765
p.V254L
ML-2
haematopoietic_and_lymphoid_tissue
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.6765
Drug responses associated with SOX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13647
Keratin, type II cytoskeletal 5
DEG_SPOP_SBC_1
493:497
VVTSS
SPOP
0.7679
More...
P48431
Transcription factor SOX-2
DEG_SPOP_SBC_1
254:258
VVTSS
SPOP
0.9969
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8969:8973
VVTSS
SPOP
0.91
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9549:9553
VVTSS
SPOP
0.9841
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
19866:19870
VVTSS
SPOP
0.9845
More...
Q99519
Sialidase-1
DEG_SPOP_SBC_1
323:327
VVTSS
SPOP
0.5495
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
285:289
VVTSS
SPOP
0.9842
More...
Q5TGY3
AT-hook DNA-binding motif-containing protein 1
DEG_SPOP_SBC_1
9:13
VVTSS
SPOP
0.6915
More...