DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVTSS
Uniprot ID:
Q99519
Source protein:
Sialidase-1
Source gene:
NEU1
Class:
DEG_SPOP_SBC_1
Location:
323:327
E3 ligase:
SPOP
DEGRON score:
0.5495
ASA_SCORE:
52.62
COIL:
0.51
CONS_SCORE:
0.4164
DSS_SCORE:
0.0727
HELIX:
0.0066
FCONS_SCORE:
0.5951
RIG_SCORE:
0.8139
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A322D
TCGA-B5-A1MR
UCEC
TCGA
VVTSS
DEG_SPOP_SBC_1
0.3056
p.A322D
DO41758
UCEC
ICGC
VVTSS
DEG_SPOP_SBC_1
0.3056
p.S333C
TCGA-BH-A0DZ
BRCA
TCGA
VVTSS
DEG_SPOP_SBC_1
0.1667
p.S333C
DO2919
BRCA
ICGC
VVTSS
DEG_SPOP_SBC_1
0.1667
p.V324A
TCGA-SX-A71R
KIRP
TCGA
VVTSS
DEG_SPOP_SBC_1
0.5825
p.V324A
DO49777
KIRP
ICGC
VVTSS
DEG_SPOP_SBC_1
0.5825
p.G328S
DO228659
LICA
ICGC
VVTSS
DEG_SPOP_SBC_1
0.3056
p.G328S
DO45039
LINC
ICGC
VVTSS
DEG_SPOP_SBC_1
0.3056
p.G328S
DO232224
PBCA
ICGC
VVTSS
DEG_SPOP_SBC_1
0.3056
p.P316L
SIDM00608
Plasma Cell Myeloma
GDSC
VVTSS
DEG_SPOP_SBC_1
0.1389
p.P316L
ACH-000714
Myeloma
CCLE
VVTSS
DEG_SPOP_SBC_1
0.1389
p.P316L
KMS-11
haematopoietic_and_lymphoid_tissue
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.1389
p.V318A
SIDM00134
Non-Small Cell Lung Carcinoma
GDSC
VVTSS
DEG_SPOP_SBC_1
0.1944
p.V318A
ACH-000825
Lung Cancer
CCLE
VVTSS
DEG_SPOP_SBC_1
0.1944
p.V318A
HOP-92
lung
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.1944
p.D315G
SIDM01045
Endometrial Carcinoma
GDSC
VVTSS
DEG_SPOP_SBC_1
0.1111
p.D315G
ACH-000978
Endometrial/Uterine Cancer
CCLE
VVTSS
DEG_SPOP_SBC_1
0.1111
p.D315G
EN
endometrium
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.1111
p.V323A
SIDM00976
Melanoma
GDSC
VVTSS
DEG_SPOP_SBC_1
0.5825
p.V323A
ACH-002205
Skin Cancer
CCLE
VVTSS
DEG_SPOP_SBC_1
0.5825
p.V323A
WM1552C
skin
COSMIC
VVTSS
DEG_SPOP_SBC_1
0.5825
Drug responses associated with NEU1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13647
Keratin, type II cytoskeletal 5
DEG_SPOP_SBC_1
493:497
VVTSS
SPOP
0.7679
More...
P48431
Transcription factor SOX-2
DEG_SPOP_SBC_1
254:258
VVTSS
SPOP
0.9969
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
8969:8973
VVTSS
SPOP
0.91
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
9549:9553
VVTSS
SPOP
0.9841
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
19866:19870
VVTSS
SPOP
0.9845
More...
Q99519
Sialidase-1
DEG_SPOP_SBC_1
323:327
VVTSS
SPOP
0.5495
More...
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_SPOP_SBC_1
285:289
VVTSS
SPOP
0.9842
More...
Q5TGY3
AT-hook DNA-binding motif-containing protein 1
DEG_SPOP_SBC_1
9:13
VVTSS
SPOP
0.6915
More...