DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVTTS
Uniprot ID:
Q13585
Source protein:
Melatonin-related receptor
Source gene:
GPR50
Class:
DEG_SPOP_SBC_1
Location:
592:596
E3 ligase:
SPOP
DEGRON score:
0.6486
ASA_SCORE:
61.46
COIL:
0.4464
CONS_SCORE:
0.2994
DSS_SCORE:
0.4924
HELIX:
0.0268
FCONS_SCORE:
0.9058
RIG_SCORE:
0.7407
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D589E
TCGA-24-1843
OV
TCGA
VVTTS
DEG_SPOP_SBC_1
0.25
p.D589E
DO29026
OV
ICGC
VVTTS
DEG_SPOP_SBC_1
0.25
p.D586E
TCGA-34-2604
LUSC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.1667
p.D586E
DO26433
LUSC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1667
p.P590T
TCGA-AF-2691
READ
TCGA
VVTTS
DEG_SPOP_SBC_1
0.2778
p.P590T
TCGA-BR-8690
STAD
TCGA
VVTTS
DEG_SPOP_SBC_1
0.2778
p.P590T
DO36969
READ
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2778
p.P590T
DO47911
STAD
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2778
p.A585T
TCGA-B5-A3FA
UCEC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.1389
p.A585T
DO52402
UCEC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1389
p.I606V
DO230529
LUSC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.I606V
DO230993
LUSC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.I606V
DO230990
LUSC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.D582E
DO27877
ORCA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.D582N
SIDM00216
Colorectal Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.D582N
ACH-000989
Colon/Colorectal Cancer
CCLE
VVTTS
DEG_SPOP_SBC_1
0.0556
p.D582N
SNU-175
large_intestine
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.D586G
SIDM01045
Endometrial Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.1667
p.D586G
ACH-000978
Endometrial/Uterine Cancer
CCLE
VVTTS
DEG_SPOP_SBC_1
0.1667
p.D586G
EN
endometrium
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with GPR50 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48549
G protein-activated inward rectifier potassium channel 1
DEG_SPOP_SBC_1
14:18
VVTTS
SPOP
0.9146
More...
P85037
Forkhead box protein K1
DEG_SPOP_SBC_1
527:531
VVTTS
SPOP
0.6903
More...
Q13585
Melatonin-related receptor
DEG_SPOP_SBC_1
592:596
VVTTS
SPOP
0.6486
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
1339:1343
VVTTS
SPOP
0.5532
More...
Q7L190
Developmental pluripotency-associated protein 4
DEG_SPOP_SBC_1
193:197
VVTTS
SPOP
0.7183
More...
Q8IUR5
Protein O-mannosyl-transferase TMTC1
DEG_SPOP_SBC_1
2:6
VVTTS
SPOP
0.853
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3981:3985
VVTTS
SPOP
0.9671
More...
Q9NWB7
Intraflagellar transport protein 57 homolog
DEG_SPOP_SBC_1
7:11
VVTTS
SPOP
0.7919
More...