DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVTTS
Uniprot ID:
Q9NWB7
Source protein:
Intraflagellar transport protein 57 homolog
Source gene:
IFT57
Class:
DEG_SPOP_SBC_1
Location:
7:11
E3 ligase:
SPOP
DEGRON score:
0.7919
ASA_SCORE:
93.06
COIL:
0.8834
CONS_SCORE:
0.1746
DSS_SCORE:
0.5043
HELIX:
0.0334
FCONS_SCORE:
0.9118
RIG_SCORE:
0.7948
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A6V
TCGA-B5-A5OC
UCEC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.3056
p.A6V
DO52405
UCEC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.D15A
TCGA-CZ-4864
KIRC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.2222
p.D15A
DO16178
KIRC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2222
p.V8L
TCGA-EK-A3GK
CESC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.5654
p.V8L
DO49964
CESC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.5654
p.A6D
DO228976
LICA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.A6D
DO229037
LICA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.A6D
DO229041
LICA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.T2N
DO229018
LICA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1944
p.G16R
DO222379
MELA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1944
p.G12A
SIDM00962
Chronic Myelogenous Leukemia
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM01261
Breast Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM00262
Ewing's Sarcoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM00477
Esophageal Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM00539
Esophageal Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM00314
Breast Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.G12A
SIDM01475
Ovarian Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.3056
p.E14K
SIDM00573
Glioblastoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.25
p.E14K
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
VVTTS
DEG_SPOP_SBC_1
0.25
p.E14K
ACH-000784
Esophageal Cancer
CCLE
VVTTS
DEG_SPOP_SBC_1
0.25
p.E14K
ACH-001606
Brain Cancer
CCLE
VVTTS
DEG_SPOP_SBC_1
0.25
p.E14K
no-11
central_nervous_system
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.25
p.E14K
KYSE-70
oesophagus
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.25
Drug responses associated with IFT57 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48549
G protein-activated inward rectifier potassium channel 1
DEG_SPOP_SBC_1
14:18
VVTTS
SPOP
0.9146
More...
P85037
Forkhead box protein K1
DEG_SPOP_SBC_1
527:531
VVTTS
SPOP
0.6903
More...
Q13585
Melatonin-related receptor
DEG_SPOP_SBC_1
592:596
VVTTS
SPOP
0.6486
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
1339:1343
VVTTS
SPOP
0.5532
More...
Q7L190
Developmental pluripotency-associated protein 4
DEG_SPOP_SBC_1
193:197
VVTTS
SPOP
0.7183
More...
Q8IUR5
Protein O-mannosyl-transferase TMTC1
DEG_SPOP_SBC_1
2:6
VVTTS
SPOP
0.853
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3981:3985
VVTTS
SPOP
0.9671
More...
Q9NWB7
Intraflagellar transport protein 57 homolog
DEG_SPOP_SBC_1
7:11
VVTTS
SPOP
0.7919
More...