DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VVTTS
Uniprot ID:
Q5VUA4
Source protein:
Zinc finger protein 318
Source gene:
ZNF318
Class:
DEG_SPOP_SBC_1
Location:
1339:1343
E3 ligase:
SPOP
DEGRON score:
0.5532
ASA_SCORE:
89.74
COIL:
0.9074
CONS_SCORE:
0.2573
DSS_SCORE:
0.4851
HELIX:
0.0718
FCONS_SCORE:
0.9079
RIG_SCORE:
0.818
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1335S
TCGA-26-1799
GBM
TCGA
VVTTS
DEG_SPOP_SBC_1
0.2222
p.P1335S
DO11603
GBM
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2222
p.P1353S
TCGA-2W-A8YY
CESC
TCGA
VVTTS
DEG_SPOP_SBC_1
0.0556
p.P1353S
DO223732
CESC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.0556
p.T1342A
TCGA-AA-3815
COAD
TCGA
VVTTS
DEG_SPOP_SBC_1
0.7139
p.T1342A
DO9924
COAD
ICGC
VVTTS
DEG_SPOP_SBC_1
0.7139
p.P1335H
TCGA-IB-7651
PAAD
TCGA
VVTTS
DEG_SPOP_SBC_1
0.2222
p.P1335H
DO46657
PAAD
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2222
p.P1335R
DO222754
ESCA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.2222
p.S1334R
DO232224
PBCA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with ZNF318 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48549
G protein-activated inward rectifier potassium channel 1
DEG_SPOP_SBC_1
14:18
VVTTS
SPOP
0.9146
More...
P85037
Forkhead box protein K1
DEG_SPOP_SBC_1
527:531
VVTTS
SPOP
0.6903
More...
Q13585
Melatonin-related receptor
DEG_SPOP_SBC_1
592:596
VVTTS
SPOP
0.6486
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
1339:1343
VVTTS
SPOP
0.5532
More...
Q7L190
Developmental pluripotency-associated protein 4
DEG_SPOP_SBC_1
193:197
VVTTS
SPOP
0.7183
More...
Q8IUR5
Protein O-mannosyl-transferase TMTC1
DEG_SPOP_SBC_1
2:6
VVTTS
SPOP
0.853
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3981:3985
VVTTS
SPOP
0.9671
More...
Q9NWB7
Intraflagellar transport protein 57 homolog
DEG_SPOP_SBC_1
7:11
VVTTS
SPOP
0.7919
More...