DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VVTTS
Uniprot ID:
Q8IUR5
Source protein:
Protein O-mannosyl-transferase TMTC1
Source gene:
TMTC1
Class:
DEG_SPOP_SBC_1
Location:
2:6
E3 ligase:
SPOP
DEGRON score:
0.853
ASA_SCORE:
96.3
COIL:
0.818
CONS_SCORE:
0.23
DSS_SCORE:
0.8802
HELIX:
0.0784
FCONS_SCORE:
1.0315
RIG_SCORE:
0.785
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H14Q
DO225028
BRCA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1111
p.N2T
DO3001
BRCA
ICGC
VVTTS
DEG_SPOP_SBC_1
0.7055
p.P3L
DO44907
LIHC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.7582
p.R14S
DO224563
LUSC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1111
p.N2S
DO42280
UCEC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.7069
p.L13V
DO42793
UCEC
ICGC
VVTTS
DEG_SPOP_SBC_1
0.1389
p.C15Y
KP-1N
pancreas
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.0833
p.I11T
J82
urinary_tract
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.1944
p.H14R
SNU-1040
large_intestine
COSMIC
VVTTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with TMTC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVTTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48549
G protein-activated inward rectifier potassium channel 1
DEG_SPOP_SBC_1
14:18
VVTTS
SPOP
0.9146
More...
P85037
Forkhead box protein K1
DEG_SPOP_SBC_1
527:531
VVTTS
SPOP
0.6903
More...
Q13585
Melatonin-related receptor
DEG_SPOP_SBC_1
592:596
VVTTS
SPOP
0.6486
More...
Q5VUA4
Zinc finger protein 318
DEG_SPOP_SBC_1
1339:1343
VVTTS
SPOP
0.5532
More...
Q7L190
Developmental pluripotency-associated protein 4
DEG_SPOP_SBC_1
193:197
VVTTS
SPOP
0.7183
More...
Q8IUR5
Protein O-mannosyl-transferase TMTC1
DEG_SPOP_SBC_1
2:6
VVTTS
SPOP
0.853
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
3981:3985
VVTTS
SPOP
0.9671
More...
Q9NWB7
Intraflagellar transport protein 57 homolog
DEG_SPOP_SBC_1
7:11
VVTTS
SPOP
0.7919
More...