DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ADSST
Uniprot ID:
P38398
Source protein:
Breast cancer type 1 susceptibility protein
Source gene:
BRCA1
Class:
DEG_SPOP_SBC_1
Location:
1481:1485
E3 ligase:
SPOP
DEGRON score:
0.9987
ASA_SCORE:
78.3
COIL:
0.8608
CONS_SCORE:
0.3397
DSS_SCORE:
0.595
HELIX:
0.1142
FCONS_SCORE:
0.9852
RIG_SCORE:
0.6035
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1487C
TCGA-92-8063
LUSC
TCGA
ADSST
DEG_SPOP_SBC_1
0.2778
p.S1494Y
TCGA-FU-A3TX
CESC
TCGA
ADSST
DEG_SPOP_SBC_1
0.0833
p.G1492R
TCGA-FV-A23B
LIHC
TCGA
ADSST
DEG_SPOP_SBC_1
0.1389
p.H1472R
DO23496
LINC
ICGC
ADSST
DEG_SPOP_SBC_1
0.0833
p.H1472R
DO45053
LINC
ICGC
ADSST
DEG_SPOP_SBC_1
0.0833
p.A1481V
ACH-000983
Leukemia
CCLE
ADSST
DEG_SPOP_SBC_1
0.5825
p.A1481V
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
ADSST
DEG_SPOP_SBC_1
0.5825
p.S1495C
PANC-02-03
pancreas
COSMIC
ADSST
DEG_SPOP_SBC_1
0.0556
p.Q1471H
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
ADSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with BRCA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20930
Filaggrin
DEG_SPOP_SBC_1
1689:1693
ADSST
SPOP
0.9922
More...
P35659
Protein DEK
DEG_SPOP_SBC_1
285:289
ADSST
SPOP
0.9954
More...
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1481:1485
ADSST
SPOP
0.9987
More...
Q14005
Pro-interleukin-16 [Cleaved into: Interleukin-16
DEG_SPOP_SBC_1
774:778
ADSST
SPOP
0.9891
More...
Q14CM0
FERM and PDZ domain-containing protein 4
DEG_SPOP_SBC_1
1169:1173
ADSST
SPOP
0.9539
More...
Q9H987
Synaptopodin 2-like protein
DEG_SPOP_SBC_1
398:402
ADSST
SPOP
0.8996
More...
Q9UER7
Death domain-associated protein 6
DEG_SPOP_SBC_1
680:684
ADSST
SPOP
0.9989
More...
Q12872
Splicing factor, suppressor of white-apricot homolog
DEG_SPOP_SBC_1
335:339
ADSST
SPOP
0.9423
More...