DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ADSST
Uniprot ID:
Q14CM0
Source protein:
FERM and PDZ domain-containing protein 4
Source gene:
FRMPD4
Class:
DEG_SPOP_SBC_1
Location:
1169:1173
E3 ligase:
SPOP
DEGRON score:
0.9539
ASA_SCORE:
80.88
COIL:
0.8606
CONS_SCORE:
0.382
DSS_SCORE:
0.6047
HELIX:
0.1232
FCONS_SCORE:
0.9642
RIG_SCORE:
0.6297
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1169T
TCGA-32-2495
GBM
TCGA
ADSST
DEG_SPOP_SBC_1
0.7139
p.A1169T
DO11908
GBM
ICGC
ADSST
DEG_SPOP_SBC_1
0.7139
p.K1179R
TCGA-CC-A9FW
LIHC
TCGA
ADSST
DEG_SPOP_SBC_1
0.2778
p.K1179R
DO219557
LIHC
ICGC
ADSST
DEG_SPOP_SBC_1
0.2778
p.S1159L
DO225215
BRCA
ICGC
ADSST
DEG_SPOP_SBC_1
0.0556
p.S1159L
DO227836
BRCA
ICGC
ADSST
DEG_SPOP_SBC_1
0.0556
p.S1172F
DO220906
MELA
ICGC
ADSST
DEG_SPOP_SBC_1
0.7982
p.ED1167EN
DO222843
MELA
ICGC
ADSST
DEG_SPOP_SBC_1
0
p.D1162E
SIDM00414
Bladder Carcinoma
GDSC
ADSST
DEG_SPOP_SBC_1
0.1389
p.D1162E
ACH-000545
Bladder Cancer
CCLE
ADSST
DEG_SPOP_SBC_1
0.1389
p.D1162E
VM-CUB-1
urinary_tract
COSMIC
ADSST
DEG_SPOP_SBC_1
0.1389
p.A1169S
SIDM00750
Non-Small Cell Lung Carcinoma
GDSC
ADSST
DEG_SPOP_SBC_1
0.7588
p.A1169S
ACH-000869
Lung Cancer
CCLE
ADSST
DEG_SPOP_SBC_1
0.7588
p.A1169S
NCI-H1568
lung
COSMIC
ADSST
DEG_SPOP_SBC_1
0.7588
p.D1170E
ACH-002046
Endometrial/Uterine Cancer
CCLE
ADSST
DEG_SPOP_SBC_1
0.5647
p.S1164N
OC-314
ovary
COSMIC
ADSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with FRMPD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20930
Filaggrin
DEG_SPOP_SBC_1
1689:1693
ADSST
SPOP
0.9922
More...
P35659
Protein DEK
DEG_SPOP_SBC_1
285:289
ADSST
SPOP
0.9954
More...
P38398
Breast cancer type 1 susceptibility protein
DEG_SPOP_SBC_1
1481:1485
ADSST
SPOP
0.9987
More...
Q14005
Pro-interleukin-16 [Cleaved into: Interleukin-16
DEG_SPOP_SBC_1
774:778
ADSST
SPOP
0.9891
More...
Q14CM0
FERM and PDZ domain-containing protein 4
DEG_SPOP_SBC_1
1169:1173
ADSST
SPOP
0.9539
More...
Q9H987
Synaptopodin 2-like protein
DEG_SPOP_SBC_1
398:402
ADSST
SPOP
0.8996
More...
Q9UER7
Death domain-associated protein 6
DEG_SPOP_SBC_1
680:684
ADSST
SPOP
0.9989
More...
Q12872
Splicing factor, suppressor of white-apricot homolog
DEG_SPOP_SBC_1
335:339
ADSST
SPOP
0.9423
More...